Natronorubrum daqingense: BB347_01945
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Entry
BB347_01945 CDS
T04679
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hda
Natronorubrum daqingense
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hda03032
]
BB347_01945
03400 DNA repair and recombination proteins [BR:
hda03400
]
BB347_01945
Enzymes [BR:
hda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BB347_01945
DNA replication proteins [BR:
hda03032
]
Prokaryotic type
DNA Topoisomerases
BB347_01945
DNA repair and recombination proteins [BR:
hda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BB347_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
IMS_HHH_1
HHH
DNA_pol_lambd_f
DUF4332
Motif
Other DBs
NCBI-ProteinID:
APX95474
UniProt:
A0A1N6Z3T6
LinkDB
All DBs
Position
398310..400799
Genome browser
AA seq
829 aa
AA seq
DB search
MELIITEKNNAARRIADILSGGTYDSTRTKGVNVYEWGGKRCVGLSGHVVGVDFPAEYSD
WRDVEPVELIDADVEKTATKENIVATLRILSRKAERVTIATDYDREGELIGKEAYDIVRN
VDDDVPIQRVRFSSITENEVTSAFDEPDELDFDLAAAGEARQIIDLIWGAALTRFLSLSS
GQLGNDFISVGRVQSPTLKLIVDREREIEAFDPETYWELFADLEKDGEATFDAQYFYRDE
DDNEAERVWEEAVASEVFETLSERDSATVVDVNRRTRTDTPPTPFNTTQFIRAASAIGYS
AKRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPEELLDDFVGHPTLGESAESLLESDDDI
VPTEGDEETTDHPPIHPTGEIPSRGGDVSDDEWEIFELVVRRFYATVAEAAIWEHLKVVT
EVDDYRMKSNGKRLVEAGYHDVYPYFNTSENFVPNVDEGEELALVDVDLEEKETQPPRRY
GQSRLIETMESLGIGTKSTRHDILEKLYDRGYVESDPPRPTRLAMAVVTAAEDYADRVVS
EDMTAQLEADMDAIANGDATLDDVTDESREMLEEIFANLADSRDEIGDQLRKSLKDDKRL
GPCPECGEDLLVRRSRHGSYFVGCDGYPDCENTLPLPSTGKPLILESECEDHGLNEVKML
AGRQTFVHGCPLCKAEDAGEGPVLGECPECGSDEGGELAVKTLQSGSRLVGCTRYPDCEY
SLPLPRRGDIEVTDERCEEHDLPELLVHSGDDPWELGCPICNYQEFQARESDSGSDLESL
EGVGAKTVEKLETAGIESLADLTEADPDTVAEDVDGVSADRVRSWQAKA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
gtggaattaatcatcaccgagaagaacaacgccgcgagacggatcgccgatattctgagc
ggtggcacgtacgactcgactcggaccaagggcgtcaacgtctacgagtggggtggcaaa
cgctgcgtcgggctctcggggcacgtcgtcggcgtcgacttccccgccgagtactccgac
tggcgggacgtcgaacccgtcgaattgatcgacgcggacgtcgagaagacggcgacgaaa
gagaatatcgttgcgacgcttcgcatcctctctcggaaggcggaacgagtgacgatcgcg
acggactacgaccgcgaaggggaactgatcgggaaggaagcctacgacatcgtccgcaac
gtggacgacgacgtcccgattcagcgagttcggttctcctcgatcaccgaaaacgaggtt
acgagcgcgttcgacgaaccggacgaactcgacttcgacctcgcggccgccggcgaagcc
cgacagatcatcgacctcatctggggtgccgcgctgacccgctttctctcactgtcctcg
ggccaactcgggaacgacttcatctccgtcggacgcgtccagtcaccgacgctcaagttg
atcgtcgaccgcgagcgcgagatcgaagccttcgatccggagacctactgggaactgttt
gccgacctcgagaaggacggcgaggccacgttcgacgcccagtacttctaccgcgacgaa
gacgacaacgaagccgagcgcgtctgggaggaagccgtcgcgagcgaggtcttcgagacc
ctcagcgagcgcgacagcgcgacggtcgtcgacgtcaaccggcgaacgcggacggacacc
cccccgacgccgttcaacacgacccagttcatccgcgcggcgagcgcgatcggctactcg
gccaagcgggcgatgtcgatcgccgaggacctctacaccgcgggctacatcacctacccc
cggacggacaacaccgtctaccccgacgacttagaccccgaggaactgctcgacgacttc
gtcggccacccgacgctcggcgagtcggccgaatcgctgctcgagtcggacgacgacatc
gtccccactgagggtgacgaggagacgaccgaccacccgccaatccatccgacgggtgag
attccctcccgcggcggcgacgtgagcgacgacgagtgggagatcttcgaactcgtcgtt
cgtcggttctacgcgacggtcgccgaagcagccatctgggagcacctcaaggtcgttacc
gaggtcgacgactaccgcatgaagtccaacgggaaacgcctcgtcgaagcgggctaccac
gacgtctacccgtacttcaacaccagtgagaacttcgtcccgaacgtcgacgagggcgaa
gaactcgcgctggtcgacgtcgacctcgaggagaaagagacccagccaccacgtcgatac
ggccagtcccggctcatcgagacgatggaatcgctggggatcgggacgaagtcgactcgc
cacgacatcctcgagaaactctacgaccggggctacgtcgagagcgatccgccgcggccg
acccggctggcgatggccgtcgtcacggctgcggaggactacgccgaccgcgtcgtcagc
gaggacatgacagcccaactcgaggcggacatggacgccatcgcgaacggcgatgctacc
ctggacgacgtcaccgacgagtcccgcgagatgttagaggagatcttcgcgaacctcgcg
gactcgcgcgacgaaatcggcgaccagttgcgcaagtcgctcaaggacgacaaacggctc
ggcccgtgtcccgagtgcggcgaggacctgctcgttcgacgcagtcgccacggctcgtac
ttcgtcggctgtgacggctatcccgactgtgagaacacgctgcccctgccctcgacgggc
aaaccgctcatcctcgagagcgagtgtgaagaccacggtctgaacgaggtgaagatgctc
gcgggccgccagacgttcgtccacgggtgtccgctctgtaaagccgaagacgccggcgaa
gggccggtcctcggcgagtgtccggagtgtggcagcgacgagggaggcgaactcgccgtc
aaaacgctccagagcggctcgaggctcgtcggctgtacgcgttatcccgactgcgagtac
tcgctgcccctgccgcgtcgcggcgacatcgaagtcaccgacgaacgctgcgaggagcac
gacctccccgaactgctcgtccacagcggcgacgacccctgggagctgggttgtccgatc
tgtaactatcaggagtttcaggcccgagagagcgacagcggctccgacctcgagtccctc
gagggcgtcggcgcgaagacggtcgaaaaactcgagaccgccgggatcgagagcctcgcg
gatctgaccgaggccgatcccgatacggtcgccgaagacgtcgacggcgtcagtgccgat
cgcgttcgctcttggcaggcgaaagcctga
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