KEGG   Natronorubrum daqingense: BB347_07645
Entry
BB347_07645       CDS       T04679                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hda  Natronorubrum daqingense
Pathway
hda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB347_07645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hda03019]
    BB347_07645
Messenger RNA biogenesis [BR:hda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BB347_07645
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: APX96498
UniProt: A0A1N7ED20
LinkDB
Position
1560613..1561965
AA seq 450 aa
MEIEIATIGGYEEVGRQMTAVRAGDDVVIFDMGLNLSQVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVATPFTIELVKQQIEGEQK
FGVENDLIKMDAGETMSIGDSGKVDLEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
TPVLGDPIDMERFREIGREGNGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSMEDYD
GGIVATTFSSHIARVKSLVEFANDIGRQPVLLGRSMEKYSGTAERLDFVDFPSDLGMFGH
RKSVDRTFKRIMNEGKEDFLPIVTGHQGEPRAMLTRMARGETPYQLDDGDKVVFSARVIP
EPTNEGQRYQAEKLLGMQGARVYDDIHVSGHMNQEGHYTMLNALQPQHIIPAHQDLKGLS
GYVNLCESEGYKMGRDIHVSRNGNLIQLVD
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatagaaattgcaacaatcggcggctacgaagaagttggacggcagatgactgcc
gtccgcgccggtgacgacgtcgtcatcttcgatatgggcctgaacctctcgcaggttctc
atccacgacaacgtcgaaaccgaacggatgcacagtctcgatctgatcgatatgggtgcg
atccccgacgatcggatcatgagcgacctcgagggcgacgttcaggcgatcgtcccgacg
cacggtcacctcgaccacatcggtgcgatctcgaaactcgcacaccgttacgacgcaccc
atcgtcgcgacgccgtttacgatcgaactcgtcaaacagcagatcgaaggcgagcagaaa
ttcggcgtcgagaacgacctgatcaagatggacgccggcgagacgatgtcgatcggcgac
tccggcaaggtcgacctcgagttcgtcaacgtcacgcactcgatcatcgacgcgatcaac
ccagtgttgcacacgccggaaggcgctgtcgtctacggactggacaagcgtatggaccac
acgccggtgctcggcgatccgatcgacatggagcgattccgcgagatcggtcgcgaaggc
aacggcgtcctctgttacatcgaggactgtacgaacgcgaacaagaagggccgcacgccc
tccgaaaacgtcgctcgcgaacacctccgtgacgttctctacagtatggaggactacgac
ggcggcatcgtcgcgacgacgttctcgagtcacatcgcacgcgtgaagtccttagttgag
ttcgcaaacgacatcggccgtcagccagtcttgctgggccgttcgatggagaagtactcg
ggaaccgcagaacgactcgacttcgtcgacttcccgtcggatcttgggatgttcggtcac
cggaaatccgtcgaccgcaccttcaaacgcatcatgaacgaaggcaaggaggacttccta
ccgatcgtgaccggtcaccagggagagcctcgagcgatgcttacgcggatggcccgcggc
gagacaccgtatcaactggacgacggcgacaaggtcgtcttctccgcacgtgtcattccg
gagccgacgaacgagggccagcgctaccaggccgagaaactcctgggtatgcagggcgct
cgcgtctacgacgacatccacgtctccgggcacatgaaccaggagggccactacacgatg
ctcaatgcgctgcagccacagcacatcatcccggctcaccaggatctcaagggcctctcg
gggtacgtcaacctctgtgagagcgaggggtacaagatgggccgagacatccacgtctcg
agaaatggcaacctcattcagctcgtcgattga

DBGET integrated database retrieval system