Natronorubrum daqingense: BB347_09180
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Entry
BB347_09180 CDS
T04679
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
hda
Natronorubrum daqingense
Pathway
hda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BB347_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hda03019
]
BB347_09180
Messenger RNA biogenesis [BR:
hda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BB347_09180
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Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
DUF6564
DUF4407
Motif
Other DBs
NCBI-ProteinID:
APX96777
UniProt:
A0A1N7C804
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All DBs
Position
complement(1883763..1884830)
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AA seq
355 aa
AA seq
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MQIKDREQVEGGRERVTVVPESVDDLWHLQYVLEPGDRVAGDTTRRIQRNDEQMRDTGGE
REPMWVAIAVDDVEFHKFANRLRVGGEIVACSREDQLGFHHTLNVEEREELSIEKRFKPD
QEARLEEAEEATENPDVAIATVEEGQAHVHTVAQYGTEERATITGPTGKGEYARERSELF
SELGDVLKRQDADAIILAGPGFTKQDARKYLEDNHHEVAEKITMVDTAAVGDRGVHEVLK
RGAVADVQQETRIESEAEYIDELTQRMADGAKAAYGPDQVQQAAEFGAIERLLVLDDRLQ
KERGPDGEWAVRIDEIVRTTEQKGGDVTVFSSEFPPGQQLSNLGGIAALLRYRLE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaaagaccgggagcaggtcgaaggcgggcgcgagcgggtgacggtcgtcccc
gagagcgtcgacgacctctggcacctgcagtacgtcttagagcccggcgatcgcgttgca
ggcgatacgacccggcgcatccagcgcaacgacgagcagatgcgcgacacgggcggcgaa
cgcgaacccatgtgggtcgctatcgccgtcgacgacgtcgagttccacaagttcgccaac
cgactgcgcgtcggcggcgagatcgtcgcctgctcgcgcgaggatcaactgggctttcac
cacacgctcaacgtcgaagagcgcgaggaactctcgatcgagaagcgcttcaaacccgac
caggaagcccgactcgaggaggccgaggaggcaaccgagaacccggacgtcgccatcgcc
accgtcgaggaaggacaggcccacgtccacacggttgcccagtacggcaccgaagagcga
gcgacgatcaccggccccaccggcaagggcgagtacgcccgcgaacgctcggaactgttc
tcggaactcggcgatgtcctcaagcgccaggacgccgatgccattatcctcgccggtccc
ggtttcaccaaacaggacgcacggaagtacctcgaggacaaccaccacgaggtcgccgag
aagatcacgatggtcgatacggcggccgtcggcgaccgcggggtccacgaggtgctcaag
cgcggtgccgtcgctgacgttcaacaggagacgcgcatcgagagcgaggccgagtacatc
gacgaacttacccagcgaatggccgacggggccaaggccgcttacggacccgatcaggtc
caacaagccgccgaattcggtgccatcgagcgactgctcgtcctcgacgaccgattgcaa
aaagaacgcgggccggacggcgagtgggccgtccgcatcgacgagatcgtccgcacgacc
gaacagaaaggcggcgacgttaccgtcttctcgagcgagtttccacccggccagcagcta
tcgaatctgggcgggatcgcggcactcttgcgataccgactcgagtga
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