Natronorubrum daqingense: BB347_10445
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Entry
BB347_10445 CDS
T04679
Name
(GenBank) ATP-dependent DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hda
Natronorubrum daqingense
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hda03400
]
BB347_10445
Enzymes [BR:
hda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB347_10445
DNA repair and recombination proteins [BR:
hda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BB347_10445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
APX97005
UniProt:
A0A1N7CQ34
LinkDB
All DBs
Position
2147686..2151573
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AA seq
1295 aa
AA seq
DB search
MGENPHEPRGNQQGVIDSTAACTSVDAGAGTGKTTTMLMRLEQAIERGDVDPADVLVLTF
ANEAASSIRAAVSDRLDPETAAAIDINTYHSFCYGLVREYAYYLGYSPEFDVVTERTRRR
IVGRLLAENEYDFATTMGRGEPSPDDVTAGVDRFIQSMSQEDITPDQLDDQLPAVRTLEL
CHEFVLWLEETAEERLSFDNEALRYFNRDEHLEGAESALVDYGKLITFCREKIAEAPAAF
RGDEFVREIDHYLTLLQQSVTNTIDALSLEEPTTKQLPRALFGNEIWRGSTGRLEQSPFG
RLKHYVEFVRLARHYTAVYADYHATLEDERTLDFDELVRTATTLVTDDGVADEITSQWTQ
VYCDEFQDTDRTQFRLITELTDGPDRPDLLAIGDKDQSIYGWRGTDREGLDRLATVYDDH
ESYELELNFRSKQEILALTNHCDYGQQGSKTLREADRATSSTPADEADLGSGPHTISECD
RDRESPTGGERRGDESAVDRVVKVESDEIDRSTAEQVGTTVSRLLNGDADAVSQRSLEDI
AVIVRTNRHAQAVAAELNTRQLPYEISGSAYGEVSPGLQTLLSYFRVLVDPAADAHLRRV
LLYRYRVSEADLATLQRRDGTLYDAVMGLESDADAGDDADAGADTGLESSLERPKRVHNA
RTHLEELETLRDVYPLSGFVGRFREVTRLEWYCTSDERDELGRLERFIESYTADSVVQTV
TPAFVDALERTLRSGSGDRTRGTHSADAIDVMTVHQAKGLEFDTVLVPYLSDEEWCVERD
YARRARYQLLAATLDDDVDSPLRADLAAETVGEEWRVLHVALTRAENHLFVFGSTYDYDG
EDEELGASTADACLADDLEWSVTGEQMTLWESLTKSFERVRESFPETVADRTDEIADSAD
RTPGTITYYSGYDDRTAEPLETRTAIETVHDLGRMLREGTLLPVADAVSATGDDVFGGTS
DDNSESSTTEAGGTVAETSSASASRRVPSERRLSSLTGETVRFPVGTLANATDVPAALRH
SYTSLATHETCPRKHYLDHVVHAIGDSSVRTLEDGTPLESHSEDDGTVSGDTAVPRLVGT
VFHDVAEEAFYRNDATRDDWREVAIRQLTARGVLEHRERVLSCVDRYFDASAPAFDDPVH
EWEPLAAEVPFTLADVPNVRGDVVGFIDSVRRTPEGDLVVLDYKATAERISPSEASQLAL
YVRACEQAFDEPVTAAGYVYVGPVDGPRVDLFAPEELPPWSSIHRTLEAADDPSFTETTT
GEHCQYCPHRSLGCAPEEYIDDHLETELAESAGDD
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaatcctcacgagccgcggggcaatcaacagggcgtgatcgatagtacggcc
gcctgtacctccgtcgatgccggtgcaggcacggggaagacgacgacgatgctcatgcga
ctcgagcaggcgatcgagcgaggcgacgtcgaccccgcggacgtgctggtgttgacgttc
gcgaacgaagccgcgagtagtattcgcgctgcggtgagcgatcgcctcgacccggagacg
gccgccgcgatcgacatcaacacgtaccactcgttttgttacgggctggtccgcgagtac
gcctactacctcggctactcgcccgaattcgacgtcgtcactgaacggacgcgacgccgg
atcgtgggtcgtttgctcgccgagaacgagtacgacttcgcgacgacgatgggacgtggt
gagccgtcaccggacgacgtcaccgccggcgtcgaccggtttatccaatcgatgagtcag
gaggatatcaccccggaccaactggacgaccagcttcccgccgtccgaacgctcgaactc
tgccacgaattcgtgctctggctcgaggaaaccgccgaggagcgcctctcgttcgacaac
gaggcgcttcggtactttaaccgagacgaacacctcgagggggcagaatccgcgctcgtc
gactacgggaagctgatcacgttctgtcgcgaaaagatcgcggaagcgcccgccgcgttt
cgcggcgacgaattcgtccgcgagatcgatcactacctcacgctcctccaacagagcgtg
acgaacacgatcgacgcgctctcactcgaggagccgacgacgaaacagcttcctcgagcg
ctcttcggaaacgaaatctggcgcggctcgacgggtcgactcgagcagagccccttcgga
aggctaaagcactacgtcgagttcgtgcgtctcgcgcgccactacacggccgtttacgcc
gattaccacgcgactctcgaggacgaacggacgctggatttcgacgaactcgtgcggacg
gcgacgacgctggttaccgacgacggcgttgcggacgagattacgagccagtggacccag
gtctattgcgacgaatttcaggacacagaccggacccagtttcgactcatcaccgaactc
acggacggccccgaccggcccgatttgctcgcgatcggcgacaaggaccagtcgatctac
ggctggcgcggtacggaccgggaaggcctcgacagacttgcgacggtctacgacgaccac
gaatcctacgaactcgagctcaacttccgctcgaaacaggaaattctggccctaacgaac
cattgcgactacggtcaacagggctcgaagacgcttcgagaggcagacagagcaacgtcg
tcgacaccggcagacgaagctgaccttggctctggccctcacaccatttccgagtgcgac
cgcgaccgcgaatcgccgaccggcggcgagcgccgcggcgacgagtcagccgtcgaccgc
gtcgttaaagtcgagagcgacgagatcgaccgatcgacggccgagcaggtcgggacgacg
gtctcgaggctgttgaacggcgacgccgacgccgtgtcacagcgctcgctcgaagatatc
gcggtaatcgttcggacgaatcgccacgcacaggccgtcgccgcggagttgaacacccgt
caactcccctacgaaatatccggctcggcctacggggaggtgtcgccgggactgcaaacg
ctcctgtcgtatttccgcgtgctcgtcgatcccgccgcagacgcgcacctgcgtcgggtg
ttactctaccggtatcgggtgagcgaagccgacctcgcgacgttacagcgtcgagacgga
acgctgtacgacgccgtgatggggctcgagtcggatgctgacgccggtgatgacgcagac
gccggtgctgatacgggcctcgagagcagcctcgaacgacctaagcgagtccacaacgca
cggacccacctcgaggaactcgagacgctgcgggacgtctacccactctccgggttcgtc
ggccgatttcgggaggtgacgcgactcgagtggtactgcacgagcgacgagcgcgacgaa
ctcggtcgcctcgagcgcttcatcgagtcatacaccgcagattcggtggtccagacggtg
acgccggcgttcgtcgacgcgctcgagcgtacgctccggagtggctcgggcgatcggacg
cggggtacccactctgccgacgccatcgacgtgatgacggtccatcaggcgaaaggcctc
gagttcgataccgtgttggtgccgtacctctccgacgaggagtggtgcgtcgagcgcgat
tacgcccgacgggcacgataccagctactagcggccaccctcgacgacgacgtcgactcg
ccgctgcgtgcggatctcgcggccgaaacggtcggcgaggagtggcgggtcctccacgtc
gcgctcactcgagcggagaaccacctcttcgttttcggttcgacgtacgattacgacggc
gaggacgaggaactcggcgcgtcgacggcagatgcgtgtttggcggacgacctcgagtgg
tcggtcaccggcgagcaaatgaccctctgggaatccctcaccaagagtttcgaacgcgtt
agggagtcgtttcccgaaacagtcgccgacagaaccgacgaaatcgccgactctgcagat
cgaacgcccggaacgatcacctactactccggctacgacgaccggaccgccgagccactc
gagacccggacggccatcgagacggttcacgacctcgggcggatgctccgggagggcacg
ttgttgcctgtagccgacgcagtgagcgctaccggtgacgacgttttcggtggcacaagc
gacgacaacagtgaatcgagtacaactgaggctggcggaactgtcgctgaaacctcgagt
gcgagtgcgagtcgacgagtgccgagcgaacggcggctttcgtcgctgactggtgaaacc
gttcgattccccgtcggcacgctcgcgaacgcgaccgacgtccccgccgccttgcgacac
agctacacctcgcttgcgacccacgagacgtgtccgcgaaagcactacctcgatcacgtc
gttcacgcgatcggcgattcgtccgttcggacactcgaggatgggacacctctcgagtct
cactctgaagacgacgggaccgtatctggcgataccgccgtcccacgcctcgtcgggacg
gttttccacgacgttgcagaggaggcgttctatcgaaacgacgccactcgagacgactgg
cgagaagtcgcgatccggcaactgacggcgaggggcgtcctcgagcatcgagagcgcgtc
ctcagttgtgtggatcggtacttcgacgcgagtgcgcccgcgttcgacgacccggttcac
gagtgggagccactcgccgcggaagtgccgtttaccctcgctgacgtgccgaacgtccgc
ggtgacgtcgtcggattcatcgactcggtgcgacggaccccggagggcgacctcgtcgtg
ctcgactacaaggcgacagccgaacgaatttcgccgtccgaggcgtcccaactggcgttg
tacgtccgagcgtgtgagcaggcgttcgacgagccagtgacggctgctggctacgtttac
gtcggtcccgtcgacggcccacgcgtcgacctcttcgcacccgaggaactccccccgtgg
tccagtatccatcggacgctcgaggcggctgatgacccctcgttcaccgaaacgacgacc
ggcgagcactgccagtactgtccacaccggtcacttggctgtgctcccgaggaatacatc
gatgaccatctagagacggaactggccgagtctgcgggagacgactga
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