Natronorubrum daqingense: BB347_12160
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Entry
BB347_12160 CDS
T04679
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hda
Natronorubrum daqingense
Pathway
hda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB347_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hda03021
]
BB347_12160
Enzymes [BR:
hda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB347_12160
Transcription machinery [BR:
hda03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BB347_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
APX97303
UniProt:
A0A1N7FP80
LinkDB
All DBs
Position
2505098..2508022
Genome browser
AA seq
974 aa
AA seq
DB search
MQHSTPKDIGSINFGLMEPEEYREMSATKIITADTYDDDGFPIDMGLMDPRLGVIDPGLE
CKTCGKHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRGTCRECSKLLLTEDEREEFRAD
ITESRKLGRDLNDVTKAAIRQARKKDRCPFCGEVQYDIDHEKPTTYYEVQQVLTSEYSQR
IAGAMQGDEEEGIERTTPDELAEKTEIELTRVNEILSGSFRPRESQRKAIEKALDIDLTE
EDTNKLMPSDIRDWFEAIPDEDIQVLGIDADRSRPEWMILTVLPVPPVTARPSITLDNGQ
RSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARH
RSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVAKEMTQ
TMNVTERNLEDARRFVSNGPEGHPGANYVRRPDGRRLKVTEKNCEQLAEKVEAGWEVNRH
LIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNE
EARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPRFNETQALDLLRATRI
DELPEPSGIDDEDEPFWTGHDVFSELLPDDLDLEFTGTVGDQVVVEDGQLLEGTIAEDEV
GEFGGEIVDTITKEYGNTRSRIFINEISTLAMRAIMHFGFSIGIDDETIPEEAQSRIDET
IEDANDRVEELIDAYENNDLESLPGRTIDETLEMKIMQTLSRARDNAGNIADEHFQDDNP
AVVMANSGARGSMLNLTQMAGAVGQQAVRGERINRGYEDRTLSHYEPNDLSAEAHGFVEN
SYTSGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDT
IVQFEFGEDGTSPVRVSSGTDNTIDVDDIATRVLDSEFDSEADRDDFLGTKPQLTNLSEH
ADDRLEGTEVTSDD
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacagcacaccaaaagatatcggatcgatcaacttcgggctgatggagcccgag
gagtaccgggagatgagcgcgacgaagatcatcaccgccgacacctacgacgacgacggg
ttccccatcgacatggggttgatggacccgcgtctcggcgtgatcgatcccggcctcgag
tgtaagacctgcgggaaacactccggttcctgtaacggccacttcggccacatcgaactg
gccgcgccggtcatccacgtcggctttacgaagctcattcgacgactcctgcgagggact
tgccgagagtgttcgaagctcctgctcaccgaggacgaacgagaggagttccgagcggac
atcacggagtctcgaaagctcggtcgtgacctcaacgacgtcaccaaagccgcgatccga
caggctcgaaagaaagatcgctgtccgttctgtggcgaggtccagtacgatatcgaccac
gagaagccaacgacctactacgaggtccaacaggttctgacgagcgagtactcccagcgc
atcgctggtgcgatgcagggcgacgaggaggaaggcatcgagcgaacgacgccggacgaa
cttgccgagaagacagagatcgaactcacgcgggtcaacgagattctctcgggatcgttc
cgtccacgcgagagccagcgaaaggcaatcgagaaggcactcgacatcgacctcacggaa
gaggacacgaacaaactgatgccgagtgacatccgggattggttcgaagcgattccggac
gaggatattcaggtactcggcatcgacgccgatcgttcccggccggagtggatgatcctg
acggtcctcccagttccgccggttaccgcacggccgtcgatcacgctcgacaacggccag
cgatccgaggacgacctcacccacaagctggtcgacattatccgaatcaaccagcggttc
atggagaaccgtgaggcaggagcaccacagctgatcatcgaggacctctgggaactcctg
cagtaccacgtcaccacgttcatggacaacgagatttcgggaacgccgccggcacgacac
cgctccggacgcccgctcaagacgctctcccagcgtctgaagggcaaggaaggtcgcttc
cgtggctccctgtccggaaagcgtgtcaacttctcggctcgtaccgtcatctcgccggac
ccgaccctctcgctgaacgaagtcggggttccagaccgcgtcgcgaaggagatgacccag
acgatgaacgtcaccgagcgcaatctcgaggatgcccgtcggttcgtctccaatggtccc
gagggccaccctggcgcgaattacgtccgtcggccggacgggcgacgactgaaggtgacc
gagaagaactgcgagcaactcgcagagaaggtcgaagccgggtgggaggtcaaccgacac
ctcatcgacggcgacatcgtcatcttcaaccgccagccgtcgctccaccggatgtcgatc
atggcccacgaggtcgtggttatgccgtacaagacgttccgactcaacaccgtcgtctgt
ccgccgtacaacgccgacttcgacggggacgagatgaacatgcacgccctgcagaacgag
gaggcccgcgccgaagcgcgcgtcctcatgcgcgtgcaagaacagatcctgagcccacgc
ttcggtgagaacatcatcggtgcaattcaggaccacatctccggaacgtacctgctcacg
cacgacaacccgcggttcaacgagacacaggcactcgacttgcttcgggcgacccgaatc
gacgaactgccggagccgagcggaatcgacgacgaagacgaaccgttctggaccggccac
gacgtcttctccgaactcttgcccgacgatctcgacctcgagttcaccggcactgtcggc
gatcaggtcgtcgtcgaagacgggcagttgctcgagggaacgatcgccgaggacgaagtc
ggcgagttcggcggcgaaattgtcgacacgatcacgaaagagtacggcaacacccgctcg
cggatcttcatcaacgagatttcgacgctcgcaatgcgtgcgatcatgcacttcgggttc
tcgatcgggatcgacgacgagaccatcccggaggaagcacagtctcgaatcgacgagacg
atcgaggacgcgaacgaccgcgtcgaggaactcatcgatgcctacgagaacaacgacctc
gagagtctccccggtcgaacgatcgacgagaccctcgagatgaagatcatgcagacgctc
tcgcgtgcgcgtgacaatgcggggaacatcgccgacgagcacttccaggacgacaacccg
gcggtcgttatggcgaactccggtgcgcgtgggtcgatgctcaacctgacgcagatggcc
ggcgcagtcggtcagcaggcagttcgcggggagcgaatcaaccgcggctacgaggatcgg
accctgagccactacgagccaaacgacctttccgcggaggcacacggattcgtcgagaac
tcctacaccagcggcctgacgccccgggagttcttcttccacgcgatgggtggccgcgag
ggcctggtcgacacggcagtccgaacctcgaagtccggctacctccagcgtcggctgatc
aacgccctctccgaactcgagactcaatacgacgggacggtccgagacacctcggacacc
atcgtccaattcgagtttggtgaggacggcacctcgccggttcgcgtctcctctggaacg
gacaacaccatcgatgtcgacgacatcgcgactcgcgtgctcgattcggagttcgactcc
gaggccgatcgagacgacttcctcggtacgaagccacaactgacgaacctctcggagcac
gcggatgatcgcctcgagggaacggaggtgacctccgatgactga
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