Natronorubrum daqingense: BB347_12845
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Entry
BB347_12845 CDS
T04679
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hda
Natronorubrum daqingense
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hda03016
]
BB347_12845
Enzymes [BR:
hda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BB347_12845
Transfer RNA biogenesis [BR:
hda03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BB347_12845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
TDP-43_N
Motif
Other DBs
NCBI-ProteinID:
APX97425
UniProt:
A0A1N7FUA4
LinkDB
All DBs
Position
complement(2641089..2641646)
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AA seq
185 aa
AA seq
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MRLFVSVDLPDDLAASVSTVQDEFRDASGLRFTDPEQAHVTLKFLGEVDNDRLGQLRREL
AAAVSEASVEPFSVRFGGLGVFPSLEYISVVWLGVEAGGDPLTRLQEAVESRTVAMGFDP
ESHEFTPHVTLARMDHAGGKELVQDVVREHEPTVGEMHVDSIHLTESTLTDDGPTYSSVD
SFSLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtgagcgtcgaccttcccgacgacctcgcggcgtcggtttcgaccgtt
caggacgagtttcgcgacgcgagcgggcttcgctttaccgatcccgaacaggcacacgtg
acgctcaaattcctcggcgaagtcgacaacgaccggctaggtcaactccgacgcgaactc
gccgctgccgtttccgaagcgtccgtcgagccgttttccgtccgcttcggcgggctgggc
gtgttcccgagcctcgagtacatcagcgtcgtctggctcggtgtcgaagctggaggcgac
ccactcacgcgcctccaggaagccgtcgagtcgcggacggtcgcgatgggattcgatccg
gaatcccacgagttcacgccccacgtgacgctcgcgcggatggaccacgccggcgggaaa
gaactcgtccaggacgtcgtccgcgagcacgagccgacggtgggagagatgcacgtcgat
tcgattcacctgaccgagagcacactcaccgacgacgggccgacgtactcgagtgtcgac
tcgttctcgctcgagtaa
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