Natronorubrum daqingense: BB347_13170
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Entry
BB347_13170 CDS
T04679
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hda
Natronorubrum daqingense
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hda03016
]
BB347_13170
Enzymes [BR:
hda01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BB347_13170
Transfer RNA biogenesis [BR:
hda03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BB347_13170
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
APX98263
UniProt:
A0A1P8RHY7
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Position
2701420..2702481
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AA seq
353 aa
AA seq
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MGLEGRFDEDAGVIRVGGDARQRYHDSRGYGYPLEGNEIALAPVEAAHLLYRGDLDAVVD
ASSGERLDFRSFAAREPGERFGVRFLVYADLRSRGFYLSPAAEPWIDVPPEGPTDFAVFP
RGKGPGDGEIEHALRVISERTDVPAAGLQDCVLAVVDEESEITYFDVSQRDPTGSSNPDA
SLPDRCEADLLTDRVIVWEPPRDLYEATFYGQPLEGREYEEPTLQCSLLEATYLAERDAI
DLEVETLRARGEAVEGERFGRRLTVYTELREREIVPKTGYKFGADFRTYADVESVENLGH
SELLIRVHPADHVFEPRDLALDVRLAHGVRKTMVFALVDGGEIEWWSLERLTP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggactcgaggggcgattcgacgaggacgctggcgtgatccgcgtcggcggcgacgca
cgccagcgctatcacgattcgcgggggtacggctatccgctcgagggcaacgagatcgca
ctcgcacccgtcgaggcggcacacctgctctatcgcggggatctcgacgctgtcgtcgac
gcctcgagcggggagcgactggactttcgctcgttcgcggcccgcgagccgggcgagcgc
ttcggcgttcggtttctcgtctacgcagacctccgatctcggggcttctacctctcgccg
gccgcggagccgtggatcgacgtgccgccggagggaccgacggatttcgccgtctttccc
cgcggcaaggggccaggggacggcgaaatcgagcacgccctccgcgtgatcagcgagcga
accgacgttccggcggccggccttcaggactgcgtgctcgccgtggtcgacgaggagagc
gaaatcacgtacttcgacgtctcgcagcgagatccgacgggatcgtcgaatccggacgcg
tcgcttcccgatcgctgcgaggccgacctgttgaccgaccgggtcatcgtctgggaaccc
ccacgcgacctctacgaagccacgttctacggccagccactcgaggggcgagagtacgag
gagccgacgctgcagtgttcgttgctcgaggcgacctatctcgccgaacgcgacgcgatc
gacctcgaggtggagaccctgcgagcgcgcggcgaagccgtagagggcgaacgattcggg
cgtcggctgacggtgtacaccgaactgcgcgagcgagaaatcgtccccaagacgggctac
aagttcggcgcggactttcgaacgtacgccgacgtggagtcggtcgagaacctcggccac
tccgaactcttgattcgggttcacccagccgatcacgtcttcgagccgcgagatctcgca
ctcgacgttcgcctcgcccacggcgtccgcaagacgatggtgttcgcgctggtcgacggc
ggcgagatcgagtggtggtcgctcgagcgactgacgccctga
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