Natronorubrum daqingense: BB347_13925
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Entry
BB347_13925 CDS
T04679
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hda
Natronorubrum daqingense
Pathway
hda03022
Basal transcription factors
hda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BB347_13925
09124 Replication and repair
03420 Nucleotide excision repair
BB347_13925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hda03021
]
BB347_13925
03036 Chromosome and associated proteins [BR:
hda03036
]
BB347_13925
03400 DNA repair and recombination proteins [BR:
hda03400
]
BB347_13925
Enzymes [BR:
hda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BB347_13925
Transcription machinery [BR:
hda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BB347_13925
Chromosome and associated proteins [BR:
hda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BB347_13925
DNA repair and recombination proteins [BR:
hda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BB347_13925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
DEAD_2
ResIII
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
HBB
Motif
Other DBs
NCBI-ProteinID:
APX97617
UniProt:
A0A1N7F916
LinkDB
All DBs
Position
2864650..2867025
Genome browser
AA seq
791 aa
AA seq
DB search
MTDWRSIFGHREPYDEQVDGIESAIDTAREGGYTVIEGACGTGKTMIALTAGIDLVRDPD
TDYERVFVLTSVKQQLRQFETDLETINENLPDDWNPVSGLTLVGKADVCPYNREGKAGID
DGNVYDRCETLRDRTRDLTGEGGDTTAQNLATRARSQQIGLADSGSRGGGTSQFLETAGE
PTPYPPDLPEYGEGGPVGAETEYCPFYAQYLEDLPEDGSDGDAVEAVPYDFTEAGMLTPE
DLVARSVAHGTCPHSVMGAVLGHVEVAIGNYYHAFDPQTTGSFTGALLDDSTFVVCDEAH
MLEPRVRDLVSDGVGDRTLRDAEGELSRVIQPVKFEREGRQAQGGSKTADADLVRAELND
SDVTYDELTRTLEFVQDVRSELDRRVTAFLDRKHRGWQSNLAELDDAEIPLRDPAEPAED
ELTEWARTEGYSDVDWVRLESVGAVVERILNEAEDEDRTRAAPAVGRVLGEWYRRGHTDY
FREIELERTWDDTEPSDSWRRAYNARLSLHNCVPSDAIGDRLASFGGGILMSATLEPMDA
FTDVTGLQYLEREEDRPVVERRYGLHFPAENRESFAVAAPKFTYDNRGPPGDENPTRTHY
VDAISKVGRLPGNVLVGMPSYAEADWIASALEGRLEKPVLLDAASDAETTQSLKREFFDG
DGKVLVTSLRGTLTEGVDYSGDRLSAAVICGVPIVNTSSPRTKAVRRAYEDEFGDGFTYA
LTIPAVRKARQAIGRVIRSPQDVGVRVLLDERYARDSWDSVRPFLPDDGEFQAVSPDMLE
MGLDRIRPRLE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacggactggcgttcgatcttcggccaccgcgagccctacgacgagcaagtcgacggc
atcgaatccgctatcgacaccgctcgagagggcggctataccgtcatcgaaggggcctgt
ggcaccgggaagacgatgatcgcgctcaccgccgggatcgacctcgttcgcgaccccgac
accgactacgagcgcgtcttcgttctcacgagcgtcaaacagcaactgcgccagttcgaa
acagacctcgagacgatcaacgagaatttgcccgacgactggaaccccgtctcggggctc
acgctcgtcggaaaggccgacgtctgtccgtacaaccgcgaggggaaagctggcatcgac
gacggcaacgtctacgaccgctgtgagacgctccgtgatcgaacccgcgacctcaccggc
gaaggcggcgacacgaccgcacagaacctcgccacacgcgctcgcagccaacagatcgga
ctggcggacagcggctctcgtggtggcggaaccagccagttcctcgagaccgcgggcgaa
ccgacaccgtacccgccggatcttccggagtacggcgagggcggcccggtaggtgccgaa
accgagtactgtccgttctacgcgcaatacctcgaggacctccccgaggatggcagcgac
ggtgacgcagtcgaagccgtcccctacgacttcaccgaagcgggaatgctcacgcccgaa
gacctggtcgcgcgctccgtcgcccacggaacctgcccgcactcggtgatgggggccgtg
ttgggccacgtcgaggtcgccatcggaaactactaccacgcgttcgatccccagacgacc
gggtcgttcaccggggcactcctcgatgactcgacgttcgtcgtctgtgacgaagcccac
atgttagagccccgcgtgcgcgacctggtcagcgacggcgtgggagaccgaaccctccga
gacgccgaaggcgaactctctcgagtcatccagccggtcaagttcgaacgcgaggggaga
caggcacagggtggctcgaagacggccgacgcagacctcgtcagggcggaactcaacgac
agcgacgttacctacgacgaactcacccgaacgctcgagttcgtccaggacgttcggagc
gaactcgaccgacgagtgaccgcgtttctcgaccggaaacacagggggtggcagtcgaac
ctcgcggaactcgacgatgccgagattccgcttcgcgacccggccgagcccgcggaagac
gaactgacagagtgggcccgaacggaagggtacagcgacgtcgattgggttcgtctcgaa
tccgtcggtgccgtcgtcgagcgaattttgaacgaagccgaagacgaagatagaactcgc
gcagcccccgccgtcggtcgcgtcctgggcgagtggtaccgacgcggtcacaccgactac
ttccgagagatcgaactcgagcggacgtgggacgacactgagccgtccgattcgtggcga
cgcgcgtacaacgctcgtctctccttgcacaactgcgtgccgagcgacgccatcggcgac
cgactcgcctcctttggcggcggcatcctcatgagtgcgaccctcgagccgatggacgcg
tttaccgacgtgactggtttgcagtacctcgagcgcgaagaagaccgtccggtcgtcgaa
cgacgctacggtctccacttcccggccgaaaaccgcgagagtttcgcggttgccgcaccg
aagttcacctacgacaaccgcggtcctcccggggacgagaacccgactcgaacgcactac
gtggacgccatatcgaaagtcggccgacttcccggcaacgtcctcgtcggtatgccgagt
tacgccgaggccgactggatcgcgagcgcgctcgaggggcgcctcgagaaacccgtcttg
ctcgacgcggcgagcgacgccgagacgacccagtcgctcaaacgcgagttcttcgacggt
gacggcaaggttctcgtcacgagcctccggggaacgctcaccgagggcgtcgattacagc
ggcgaccgcctctcggcggccgtcatctgtggcgttccgatcgtcaacacctcgagtccg
cggacgaaggcggtccgacgggcctacgaggacgaattcggcgacgggttcacctacgcg
ctcacgattccggcggtcagaaaggctcgccaggcgatcggccgtgtcattcgctctcca
caggatgtcggcgtccgcgtgctcctcgacgaacggtacgcgcgcgatagctgggattcg
gttcgaccgttcctccccgacgatggcgagtttcaggccgtcagcccggatatgctcgag
atgggtctcgatcggattcggccgcgtctcgagtaa
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