KEGG   Natronorubrum daqingense: BB347_15325
Entry
BB347_15325       CDS       T04679                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hda  Natronorubrum daqingense
Pathway
hda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB347_15325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hda03019]
    BB347_15325
Messenger RNA biogenesis [BR:hda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BB347_15325
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: APX97877
UniProt: A0A1N7ELI6
LinkDB
Position
3170053..3171390
AA seq 445 aa
MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNIRTEGMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVGTPFTIELVSDDAEEEQK
FDLDNDLVKMEAGETMTIGDHGCELEFVNVTHSIIQAINPVLHTPEGAIVYGLDKRMDHN
PVIGDPIDMDRFREIGREGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSMEDYDGAI
LASTFSSHIARVKSLIEFARDIGRTPILLGRSMETYSGTAKQIGVDFPSDVEMVGYRRSI
EQTLERIMNEGKENFLPIVTGHQGEPRALLTRMARGETEFELEPGDKVVYSARVIPEPTN
EGQRYQAEKLLAMQGARVYSDIHVSGHLCQEGHYTMLDALQPENIIPAHQDLSGLSGYVD
LATDQGYTLGRDIHITSNGNVIQIN
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaaattgaaattgcgacgattggcggctacgaagaagtcggacggcagatgactgcc
gtccgcgccggtgacgatatcgtgatcttcgacatgggactgaacctttcgaaggtcctc
attcacgataatatccgaaccgaagggatgcacagtctcgatctgatcgacatgggtgcg
atccccgacgaccgggtcatgagcgacttagagggcgacgttcaggcgatcgtcccgacg
cacggccacctcgatcacatcggggcgatcagcaaactcgctcatcgatacgacgcaccc
atcgtcggaacaccgttcacgatcgaactcgtaagcgacgatgccgaagaagagcagaag
ttcgatctcgacaacgatctcgtcaaaatggaggccggcgaaacgatgacgatcggtgac
cacggctgtgaactcgaattcgtcaacgtcacccactcgatcatccaggcgatcaacccg
gtcttgcacacgcccgagggggcgatcgtctacggactcgacaagcgtatggaccacaac
cctgtcatcggcgacccgatcgatatggatcgcttccgtgagatcggccgtgaaggcgtc
ctctgttacatcgaagactgtacgaacgcgaacaagaagggtagaactcccagcgagaac
gtcgcgcgagaacacctccgagacgtcctatacagcatggaggactacgacggtgcaatc
ctcgcatcgacgttctcgagccatatcgctcgagtcaaatcgctcatcgaatttgctcga
gatatcggacggacgccgatcttgctcggccgatcgatggaaacgtactcgggaaccgcc
aagcagatcggcgtcgatttcccatcggacgtcgaaatggttggctaccgtcgctccatc
gaacagaccttagagcggatcatgaacgagggcaaagagaacttcctgccgatcgtcacg
ggccaccaaggcgaaccgcgagccctactcacgcgaatggctcgtggcgaaaccgagttc
gaactcgagcccggcgacaaggtggtgtactccgcacgcgtaatccccgagccaaccaac
gagggccaacgctatcaagcggagaaattgctcgccatgcaaggagcgcgtgtctactcc
gacatccacgtttcgggccacctctgtcaggaaggccactacacgatgctcgatgcgctt
caaccggagaacatcatcccggcccaccaggatctcagtggactttcgggatacgtcgat
ctcgcgaccgatcaaggctacacgctcgggcgagatatacacatcacgtcgaacggaaac
gttattcaaataaactga

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