Natronorubrum daqingense: BB347_15325
Help
Entry
BB347_15325 CDS
T04679
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hda
Natronorubrum daqingense
Pathway
hda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB347_15325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hda03019
]
BB347_15325
Messenger RNA biogenesis [BR:
hda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BB347_15325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
APX97877
UniProt:
A0A1N7ELI6
LinkDB
All DBs
Position
3170053..3171390
Genome browser
AA seq
445 aa
AA seq
DB search
MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNIRTEGMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVGTPFTIELVSDDAEEEQK
FDLDNDLVKMEAGETMTIGDHGCELEFVNVTHSIIQAINPVLHTPEGAIVYGLDKRMDHN
PVIGDPIDMDRFREIGREGVLCYIEDCTNANKKGRTPSENVAREHLRDVLYSMEDYDGAI
LASTFSSHIARVKSLIEFARDIGRTPILLGRSMETYSGTAKQIGVDFPSDVEMVGYRRSI
EQTLERIMNEGKENFLPIVTGHQGEPRALLTRMARGETEFELEPGDKVVYSARVIPEPTN
EGQRYQAEKLLAMQGARVYSDIHVSGHLCQEGHYTMLDALQPENIIPAHQDLSGLSGYVD
LATDQGYTLGRDIHITSNGNVIQIN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaaattgcgacgattggcggctacgaagaagtcggacggcagatgactgcc
gtccgcgccggtgacgatatcgtgatcttcgacatgggactgaacctttcgaaggtcctc
attcacgataatatccgaaccgaagggatgcacagtctcgatctgatcgacatgggtgcg
atccccgacgaccgggtcatgagcgacttagagggcgacgttcaggcgatcgtcccgacg
cacggccacctcgatcacatcggggcgatcagcaaactcgctcatcgatacgacgcaccc
atcgtcggaacaccgttcacgatcgaactcgtaagcgacgatgccgaagaagagcagaag
ttcgatctcgacaacgatctcgtcaaaatggaggccggcgaaacgatgacgatcggtgac
cacggctgtgaactcgaattcgtcaacgtcacccactcgatcatccaggcgatcaacccg
gtcttgcacacgcccgagggggcgatcgtctacggactcgacaagcgtatggaccacaac
cctgtcatcggcgacccgatcgatatggatcgcttccgtgagatcggccgtgaaggcgtc
ctctgttacatcgaagactgtacgaacgcgaacaagaagggtagaactcccagcgagaac
gtcgcgcgagaacacctccgagacgtcctatacagcatggaggactacgacggtgcaatc
ctcgcatcgacgttctcgagccatatcgctcgagtcaaatcgctcatcgaatttgctcga
gatatcggacggacgccgatcttgctcggccgatcgatggaaacgtactcgggaaccgcc
aagcagatcggcgtcgatttcccatcggacgtcgaaatggttggctaccgtcgctccatc
gaacagaccttagagcggatcatgaacgagggcaaagagaacttcctgccgatcgtcacg
ggccaccaaggcgaaccgcgagccctactcacgcgaatggctcgtggcgaaaccgagttc
gaactcgagcccggcgacaaggtggtgtactccgcacgcgtaatccccgagccaaccaac
gagggccaacgctatcaagcggagaaattgctcgccatgcaaggagcgcgtgtctactcc
gacatccacgtttcgggccacctctgtcaggaaggccactacacgatgctcgatgcgctt
caaccggagaacatcatcccggcccaccaggatctcagtggactttcgggatacgtcgat
ctcgcgaccgatcaaggctacacgctcgggcgagatatacacatcacgtcgaacggaaac
gttattcaaataaactga
DBGET
integrated database retrieval system