Natronorubrum daqingense: BB347_15465
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Entry
BB347_15465 CDS
T04679
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hda
Natronorubrum daqingense
Pathway
hda03030
DNA replication
hda03420
Nucleotide excision repair
hda03430
Mismatch repair
hda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB347_15465
03420 Nucleotide excision repair
BB347_15465
03430 Mismatch repair
BB347_15465
03440 Homologous recombination
BB347_15465
03460 Fanconi anemia pathway
BB347_15465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hda03000
]
BB347_15465
03032 DNA replication proteins [BR:
hda03032
]
BB347_15465
03400 DNA repair and recombination proteins [BR:
hda03400
]
BB347_15465
Transcription factors [BR:
hda03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BB347_15465
DNA replication proteins [BR:
hda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BB347_15465
DNA repair and recombination proteins [BR:
hda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BB347_15465
MMR (mismatch excision repair)
BB347_15465
DSBR (double strand breaks repair)
HR (homologous recombination)
BB347_15465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
OB_Ssb-like
Motif
Other DBs
NCBI-ProteinID:
APX97898
UniProt:
A0A1P8RGW2
LinkDB
All DBs
Position
complement(3198930..3200375)
Genome browser
AA seq
481 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGGIADIE
PGMEEAKFVAKVISIGEVRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAEAAIGEL
EEGQVLRIKGRPKEGYSGVEVSVDDVEPDPDTEIGDVQVADTHTVEALSLGLSNVNLVGI
VLDTGSVRTFDRDDGSEGKVSNLVLGDSTGRVRVTLWDEQAETATEIDPSTTVEVVDGYV
KDRDGNLELHVGNRGAVEEVDEEVEYVPESTPIEEIEIDQTVDIAGVVRSADPKRTFDRD
DGSEGQVRNIRVQDATGDIRVAMWGEKADIDIGPGDEVALGDVEIQDGWQDDLEASAGWQ
STITVLESDSETTSAESEDDGRDENAGLSSFAGDDDTEGANVTDAGSDTDGSSDDSAGSD
EPDAGEEIEFTGVVVQAGSPVVLDDGETTMSVETDTDVGLGEEITARGVVRDGTLDANDV
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggcgtgtacgaagacctcgaggccgacgtctccctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatggggggactcgcggacgaggagacggcg
gcgatgctcgtcgctcacgaagtcggcgagagcgaggtcggcggcatcgccgacatcgaa
cccgggatggaggaagcgaagttcgtcgccaaagtcatcagcatcggcgaggttcggacg
ttcgaacgcgacggcgaggacgaggacggtcgcgtcgtcaacgtcgaagtcgcggacgag
accggctccgtgcgagccgcgttctgggacgagcacgccgaggccgccatcggagaactc
gaggaaggacaggtacttcgaatcaaggggcgaccgaaggaaggctacagcggcgtcgag
gtcagcgtcgacgatgtcgaacccgatccggacaccgaaatcggtgacgtacaagtcgcc
gatacccacaccgtcgaggcgctctcgcttggcctctcgaacgtcaatctcgtcggcatc
gtcctcgacaccggcagcgttcgcacgttcgaccgcgacgacggctccgaggggaaggtc
tcgaatctcgtcctcggcgattcgaccgggcgggtgcgcgtgacgttgtgggacgaacag
gccgagacggcgacggagatcgaccccagtaccaccgtcgaggtcgtcgacggctacgtc
aaggatcgggacgggaacctcgaactccacgtcggcaaccgcggcgcggtcgaagaagtc
gacgaagaagtggagtacgttccagagagtacgccaatcgaggagatcgaaatcgaccag
acggtggacatcgccggcgtcgtccgctcggccgacccaaaacgaaccttcgaccgtgac
gacggctccgaaggacaggttcgaaacattcgcgtgcaggacgcgaccggcgacatccgc
gtggcgatgtggggcgagaaggccgatatcgatatcggtccgggcgacgaggtcgccctc
ggcgacgtggagattcaggacggctggcaggacgatctcgaggcctccgctggttggcag
tcgacgatcacggtgctcgagtccgattcggagacgacgtccgcagagagcgaagacgac
ggtcgagacgagaacgcagggctgtcgtcgttcgccggtgacgacgacaccgagggggcc
aatgtgaccgatgcgggttcagataccgatggctcgagtgacgattccgctgggagcgac
gaaccggacgcgggtgaggaaatcgagttcaccggcgtcgtcgtccaggctggaagtccg
gtcgtcctcgacgacggcgagacgacgatgagcgtcgagaccgacaccgacgtgggcctc
ggcgaggagataaccgccagaggcgtcgtccgagacggaacgctcgacgcaaacgacgtg
ttctga
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