Natronorubrum daqingense: BB347_15700
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Entry
BB347_15700 CDS
T04679
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hda
Natronorubrum daqingense
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hda03009
]
BB347_15700
Ribosome biogenesis [BR:
hda03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
BB347_15700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
AAA_23
Rad17
AAA_16
AAA
AAA_14
AAA_33
nSTAND3
RNA_helicase
AAA_24
Fer4_6
Fer4
RsgA_GTPase
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
APX97938
UniProt:
A0A1N7AMB0
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All DBs
Position
3248138..3250003
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AA seq
621 aa
AA seq
DB search
MADDSIAVVDLDRCQPDRCSYECKNYCPPNRTGKECITLRGEDTDEGQPEQIHISEEICL
GETCGICVEKCPFDAIEIINLPKELQNDPAHRYGENAFSLYGLPAPQDGQVTGILGPNGI
GKTTAIRILAGELEPNLGRHDEDVDWDDILEAYRGTELQDYIAAVRDGDVTVARKPQYVD
QIPNTFDGNTRELLEQTNERGALDELVERLSIGPVMDQSIDDLSGGELQRVAIAATLARD
TDFYFLDEITPYLDIGQRVTAARLIRDLAEKEDRSMLVIEHDLAILDLLADTLHVAYGEP
GAYGVITAPKSVRNGINEYLSGYLDNENMRIRPDPIEFEEHAPRAASHTETLVEYPDITK
SYGEGEFSLEVEGGTIRQNEVLGIVGPNGIGKSTFAKLLTGNLEPDTVGQDPTETSSGQS
PLDAGDADLDLDISYKPQYVTIDQHMRVDAFLSSITDQFGSSYWNTEIAQPLQLERIMEQ
NLADLSGGERQRVAIAACLSDSADLYLLDEPSAHLDVEQRVQATSAIRRYAEQQDATVMV
IDHDTYMIDLLADRLMVFDGEPAEHGRAGAPQPMRDGMNDFLANLEVTFRRDERTSRPRI
NKPDSQLDKQQKTDGEYYYAP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagcatcgccgtcgtagacttagatcggtgccagccggatcgatgtagc
tacgagtgtaagaactactgcccgccgaatcggacgggaaaggagtgcatcaccctacgg
ggtgaagatacggacgaagggcaacccgaacagatccacatctccgaggagatctgtctg
ggcgaaacctgcgggatctgcgtcgagaagtgccccttcgacgccatcgagatcatcaac
ctgccgaaggaactccagaacgatccggcccatcgctacggcgagaacgccttctcgctc
tatgggctcccagctccacaggacgggcaagtcaccgggatcctcggcccgaacggtatc
gggaagaccactgccatccgaattttggccggcgaactcgagccgaatctcggacgccac
gacgaagacgtcgactgggacgacatcctcgaggcctaccgcgggacggaactccaggac
tacatcgcggccgtccgcgacggcgacgtgaccgtcgcccgaaagccccagtacgtcgac
cagattccgaacacgttcgacggaaacacgcgcgagttgctcgagcaaaccaacgaacga
ggggcgctcgacgaactcgtcgagcgactctcgatcgggccggtgatggaccagtcgatc
gacgacctctccggcggagaactccagcgtgtggccatcgcggcgacgctggctcgtgac
acggacttttacttcctcgacgagatcacgccgtatctcgatatcggccagcgagtgacg
gcagcccgattgattcgggacctcgctgagaaagaagatcgatcgatgctcgtcatcgaa
cacgatctcgccattctcgacttgctcgccgacacgctccacgtcgcctacggtgagccc
ggtgcctacggtgtcatcacggccccgaaatccgtccgaaacgggatcaacgagtacctc
tcggggtacctcgacaacgagaacatgcggatccgaccggatcccatcgagttcgaagaa
cacgcgcctcgagcggcgagtcacaccgagacgctcgtcgagtaccctgacatcaccaag
agctacggcgagggcgagttctcgctcgaggtcgagggcgggacgatccgccagaacgag
gtgctcggtatcgtcggtccgaacggaatcgggaagtcgacgttcgcgaaactcctcacg
gggaacctcgagccagacaccgtcgggcaagacccgacggaaacgtcgagcgggcaaagc
ccgctagacgcaggcgacgcggacctcgatctcgacatctcctacaaaccacagtacgtg
acgatcgaccagcacatgcgcgtcgacgccttcctctcgtcgatcacggaccagttcggt
tcctcgtactggaacaccgaaatcgcccagccgctccaactcgagcggatcatggagcaa
aacctcgcggacctctcgggcggcgaacgacaacgggtggccatcgcggcctgtctctcc
gactccgcggatctgtacttactcgacgagccgtcggcccacctcgacgtcgagcagcgg
gtgcaggcgacgagcgcgatccgacgctacgccgaacaacaggacgcgacggtcatggtc
atcgaccacgacacgtacatgatcgacctgctcgcggaccgattgatggtcttcgacggc
gagcccgccgaacacggtcgggccggcgcgccacagccgatgcgcgacggcatgaacgac
ttcctggcgaatctcgaggtcacgttccgccgggacgagcgcacgtcgcgcccgcgaatc
aacaagcccgattcgcaactcgacaaacagcagaaaacggacggcgagtactactacgcg
ccctga
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