Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0048
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Entry
HDEF_0048 CDS
T00911
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00541
Biosynthesis of various nucleotide sugars
hde01100
Metabolic pathways
hde01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HDEF_0048 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
HDEF_0048 (rfaD)
Enzymes [BR:
hde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HDEF_0048 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
Core region
HDEF_0048 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ACQ66823
UniProt:
C4K8I6
LinkDB
All DBs
Position
49531..50460
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGFIGSNIVRALNKIGYQDILVVDNLEKGAKFVNLVDLKIADYRDKDDFITSV
RAKEVLGNIEAIFHLGACSSTMEWDGQFMMKNNYEYSKTLLHFCLKACIPFLYASSAAVY
GGRTDCFIEEPQYEKPLNIYGYSKFLFDQYVRKIWPKARAPICGFRYFNVYGPRETHKGS
MASVVFHLDKQIKAGKPPQLFLGSEQFKRDFIFVDDVAQINLWCWQNQISGIFNCGTGHA
ASFQTLADTVVAYHNSKPVQYVDFPENLKGCYQTFTQADITKLRTIGYDKPFKPLDEGVT
HYLDWLNHQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcacaggtggtgcagggtttatcgggagcaatatcgttcgcgcactcaat
aaaatagggtatcaggatatccttgttgtggataatctcgaaaagggtgctaaatttgtt
aatttggttgatttaaaaatcgcagattacagagataaagatgattttattacttctgta
agggcaaaagaggttttaggaaatattgaggctatttttcatttaggggcctgctcatct
acgatggaatgggatggccagtttatgatgaaaaataactatgaatattcaaaaacattg
ttgcatttttgtttaaaagcctgcattcctttcttatatgcctcttccgcggcggtttac
ggtggaagaacagattgttttatagaagagcctcaatatgaaaaacctttaaatatctat
ggctattctaaatttttgtttgatcaatatgtgcgaaaaatatggcctaaagccagagca
ccgatctgtgggtttcgttattttaatgtgtatggccctcgtgagacccataaaggcagt
atggccagtgtcgtttttcatcttgataaacaaataaaagcaggtaaacctcctcaattg
tttttgggcagtgaacaatttaaacgcgattttatttttgtcgatgacgtcgcacagata
aacctatggtgttggcaaaatcagatttcgggtatttttaattgcgggacagggcatgcc
gcatcatttcaaacattagcggataccgtggtggcctatcataatagcaaacctgtgcaa
tatgtagattttccagaaaatctaaaaggttgctatcaaacttttacacaggcggacatc
acaaaattacgcaccataggttacgacaaaccttttaaaccccttgatgaaggggtcacc
cattatcttgattggttaaatcatcaataa
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