Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0056
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Entry
HDEF_0056 CDS
T00911
Symbol
typA
Name
(GenBank) protein possibly involved in LPS biosynthesis and host colonization
KO
K06207
GTP-binding protein
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
HDEF_0056 (typA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
BipA_C
EFG_C
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_III
Septin
FeoB_N
Dynamin_N
Roc
DUF6263
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ACQ66831
UniProt:
C4K8J4
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All DBs
Position
complement(57343..59166)
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AA seq
607 aa
AA seq
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MSSNKKNLRNIAIIAHVDHGKTTLVDKLLEQSGTFGERAETTERVMDSNDLEKERGITIL
AKNTAIKWNEYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAQDGPMPQTRFVTKKAF
AHGLQPIVVINKIDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYTSALLGTAGTDYN
DMAKDMTPLYQAIIDHVPAPEVELDGPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQSI
VIIDSQGKTRNAKVSKVFGHMGLERIEIPLAEAGDIIAITGLGDLNISDTLCDINHIESL
PALSVDEPTVSMYFCVNTSPFCGKEGKYVTSRQILERLKKELIHNVALRVEETEDSDAFR
VSGRGELHLSVLIENMRREGFELAVSRPKVINRKVDGQDQEPFENVTLDIEEQHQGSVMQ
AMGERKGDVKNMIPDGKGRIRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDLVRS
GDIGQRQNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNC
LTGKKLTNMRASGTDEATTLVPPVKMSLEQALEFIDDDELVEITPQSIRIRKRYLTENDR
KRANRTK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaataaaaagaacctacgcaatatagcgattattgcccacgttgaccatggt
aaaacaaccttggttgacaagttattagagcaatctggcaccttcggagaacgtgctgaa
acaacagaacgtgtcatggattctaatgatttagaaaaagaacgcggcattactatactc
gcaaaaaataccgccattaaatggaatgaatatcgtattaatatcgtggatacgccgggt
catgcggattttgggggggaggtagaacgtgttctttccatggtggattctgttctgtta
gtcgtcgatgcccaagatgggccaatgcctcaaacccgatttgttactaaaaaagctttt
gctcatggcttacagccaattgtcgtgattaataaaattgatcgtcctggtgcgcgtcct
gattgggtggtcgatcaggtttttgacctttttgttaatctcgatgcgacagatgaacag
cttgattttcccgttatttatacctctgcattattgggcacagcaggaaccgattacaat
gatatggccaaagatatgaccccgttatatcaagcgattatcgatcatgtgccggcacca
gaagttgagcttgatggcccatttcaaatgcaaatttctcaattagactacaacaattat
gtgggcgtcatcgggattggtcgtattaaacggggtacagtaaaacccaatcaatcgatt
gtgatcatcgacagtcaagggaaaacgcgcaatgcgaaagtcagtaaagtatttggccac
atggggttagagcggattgaaatcccgctggcagaagcaggcgatatcatcgcgatcacc
ggtttaggtgatctgaatatttctgacacactatgtgacatcaatcacattgaatctctg
cccgctctttccgttgatgaacctacagtgagcatgtatttctgtgtcaacacctcccct
ttctgcggtaaagaaggcaaatatgtcacttctcgtcaaattcttgagcgtcttaaaaaa
gaattaatccataacgtggctttacgtgttgaagaaacggaagattccgatgccttccgt
gtttcagggcgaggcgaacttcatttatctgtgttaattgaaaacatgcgccgagaagga
tttgaactggcggtttctcgtcctaaagtcattaatagaaaagtggatggccaggatcaa
gaacctttcgaaaacgtcaccctcgatattgaagaacaacatcaaggttctgtgatgcag
gcgatgggggaacgcaaaggggatgttaaaaacatgatccctgatggaaaaggccgaatt
cgtctggattacgtcattccgagccgtggcttaattggttttcgaacagagtttatgacc
atgacctcagggacgggtttactttattctacgtttagccattacgacctcgtgcgttct
ggtgacattggtcagcgtcaaaacggtgtactgatttcgaatggacaaggtaaagcggtc
gctttcgcgttattcagtttgcaagatcgtggaaaattatttttgggccacggagctgaa
gtgtatgaagggcaaatcattggcattcacacccgttcaaacgatctcactgtcaattgt
ttgacgggtaaaaaattaaccaatatgcgggcttcaggtacagatgaagcgaccactttg
gttccccctgtcaaaatgtctctagaacaagccctagagtttattgatgatgatgagtta
gttgaaattactccccaatcgattcgcatccgtaaacgttatctcactgaaaatgatcgc
aaacgcgcgaatcgaacaaaataa
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