KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0058
Entry
HDEF_0058         CDS       T00911                                 
Symbol
rgdC
Name
(GenBank) putative ribonuclease
  KO
K03554  recombination associated protein RdgC
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:hde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_0058 (rgdC)
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HDEF_0058 (rgdC)
SSDB
Motif
Pfam: RdgC SRPRB CRR7
Other DBs
NCBI-ProteinID: ACQ66833
UniProt: C4K8J6
LinkDB
Position
complement(59842..60750)
AA seq 302 aa
MIWFKNLMMYQLQCPLEKDSSELEKKLANFAFIPCGPQEKVRVGWIPPMVSHKDTLSYQV
NRQILLCAHKEEKMLPASVIKQELESQIEKLEAQQKRKLKKTEKASLKDHVFYDLLPRAF
SRFQKTWIWIDTIHQMMILDASSTKRAEEALALLRQSLGSLAVVPFTFKHPVEFILTEWI
RSDNLPSGFVLMEEAELKSTLTEGGTIRCKNQNLYSDEIALHIKSGKKVTRLALEWQESI
QLILNQDLSLKRVKFLEVLREKNSHINKKEVAQCFDADFVLMTYELTELIKNMMSAFSRY
PE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgatttggtttaaaaatttaatgatgtatcagctgcaatgtccgttagaaaaagattca
tctgagttagaaaaaaaattagcaaactttgcatttattccttgtgggcctcaagaaaag
gtcagagtaggctggatcccccctatggtgtctcacaaagacacgctcagctatcaagta
aatagacaaattctgctctgtgcccataaagaagaaaaaatgttaccggcgtctgtcata
aaacaggaacttgaaagtcaaattgaaaaactcgaggctcagcagaaacgtaaacttaaa
aaaacagaaaaagcgtcactaaaagaccacgtcttttatgatttgttacccagagcgttt
agtcgctttcaaaaaacctggatatggattgataccatacatcagatgatgatacttgat
gccagtagcactaaaagagcagaagaggctttggcattattacgtcaaagcctggggtct
ttagccgttgtgccattcacatttaaacatcctgttgaattcatattgactgaatggatc
cgttcagacaacctcccatctggattcgttcttatggaagaagcggaattaaaatcaact
ttaaccgaaggcggcaccattcgttgcaagaaccaaaatttgtatagtgatgaaattgcc
ctccatattaagtctggcaaaaaagtgacccgattagcgcttgaatggcaagaaagtatt
cagctgatattaaatcaagatctttctttaaaacgtgtcaaatttttagaagtattacgt
gaaaaaaactcacacattaataaaaaagaggttgctcagtgttttgatgctgattttgtt
ttaatgacttacgaattaaccgaattaattaaaaatatgatgagcgctttcagtaggtat
ccagaatga

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