Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0108
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Entry
HDEF_0108 CDS
T00911
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00220
Arginine biosynthesis
hde00240
Pyrimidine metabolism
hde00250
Alanine, aspartate and glutamate metabolism
hde01100
Metabolic pathways
hde01110
Biosynthesis of secondary metabolites
hde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HDEF_0108 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HDEF_0108 (carB)
00220 Arginine biosynthesis
HDEF_0108 (carB)
Enzymes [BR:
hde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HDEF_0108 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
GARS_A
BamE
Motif
Other DBs
NCBI-ProteinID:
ACQ66882
UniProt:
C4K8P5
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All DBs
Position
111261..114485
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AA seq
1074 aa
AA seq
DB search
MPKRTDINSILILGAGPIVIGQACEFDYSGVQACKALREEGYRVILVNSNPATIMTDPDI
ADATYIEPIHWELVRKIIAKEHPDALLPTMGGQTALNCALELEKKGVLSDYGVTMIGATG
EAIDKAEDRRLFDKAMKKIGLNTPRSGIVHSMEEAFSVVSEIGFPCIIRPSFTMGGSGGG
IAYNREEFEEICERGFDLSPTHELLIDESLIGWKEYEMEVIRDKNDNCIIVCSIENMDAM
GIHTGDSITVAPAQTLTDKEYQRMRHASMSVLREIGVETGGSNVQFAVDPKSGRLVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGRTPASFQPSLDYVVTKMP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGATGLDPKVSLNDPEA
ITSIRRELKDAGGERIWYIADAFRAGLSLDAVFDLTEIDSWFLMQIQELVQLEEQLTQTG
IQSLDAFFLRHLKRKGFSDARLAKLLAVPEKEIRDRRHQSNLHPVYKRVDTCAAEFRTDT
AYLYSTYEEECEARPNHEQKKIMILGGGPNRIGQGIEFDYCCVHASLALHEAGYQTIMVN
CNPETVSTDYDISDRLYFESVTLEDVLEIVRIEQPQGVIVQYGGQTPLRLARELEAAGVI
ILGTSPDAIDRVEDRERFQQAVHRLGLKQPENATAQTLEDAFLKADLLGYPLVVRPSYVL
GGRAMEIIYNRVDLQRYFQNAVQVSNDSPVLLDRFLDDAVEVDVDAICDGEHVFIGGIME
HIEEAGVHSGDSACSLPAYTLNEPIQKCMRDQVTKLAFELGVKGLMNVQFAVKKEQLYLI
EVNPRAARTVPFVSKATGIPLAKIAAKVMAGQSLVQQNMLNEIIPPYYSVKKVVLPFDKF
PGVDPILGPEMHSTGEVMGVGHTFAEAFAKAMLGSHSSMKKTGRVLLSVRDGDKTRVVDL
AKQFLQQGFELDATQGTADVLEKAGLPARRVHKVHEGRPHIQDRIKNGEYIYIVNTTSGR
QAIEDSKLIRRAALQYKVHYDTTLNGGLATVMSLMENPIEKVISLQELHASFIR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtacagatatcaacagcattctgattttgggtgccggccctattgtcatt
ggtcaagcctgtgaatttgattactctggcgttcaggcttgtaaagccttgagagaagaa
gggtatcgggtgattttggtcaattctaaccccgcgaccattatgacagatcctgacata
gcagatgccacctatattgagccaattcattgggaattggttcgcaagatcatcgccaaa
gaacatcctgatgctttattgccgaccatgggtggacaaacggcactcaattgcgcactc
gagttagagaaaaaaggggttttatcagattatggcgtgaccatgataggtgctacagga
gaagcgattgataaggctgaagaccgaaggctttttgataaagcgatgaaaaaaataggc
ctgaataccccgcgttctggcattgtccatagcatggaagaggctttttccgttgtttct
gagataggtttcccttgcattatccgcccctcctttactatgggcggcagcggcgggggg
attgcctataatcgcgaagaatttgaagaaatttgcgaacgagggtttgatttatcaccc
acgcatgaattgttgatcgatgaatccctgatcgggtggaaagaatatgaaatggaagtc
atccgtgacaaaaatgacaattgcattattgtgtgctcgatagaaaatatggatgccatg
ggcattcacactggggattctatcaccgtcgcacctgctcaaactttgacggataaagag
tatcaaagaatgcgacatgcttcgatgtcagtattacgtgaaatcggtgtcgaaacaggt
ggctcgaacgttcaatttgccgtcgacccaaaaagtggacggctggttgtcattgaaatg
aacccccgcgtttctcgttcttcagcactggcatcaaaggccaccgggtttcctatcgca
aaaattgcggcaaagctggctgttggttacaccttggatgaattaaaaaacgacattaca
ggtggccgaacgccggcgtctttccagccttctttagattatgtggtcaccaaaatgccc
cgctttaactttgagaagtttgcaggagcaaacgatcgcttgacgactcagatgaaatct
gtcggagaagtgatggccatagggcgaacttttcaagaatcgctgcaaaaagcgctcaga
gggctagaagttggggccacggggctcgatcccaaagtgtctttgaatgatccggaggcc
attacctctattcgtcgtgagctcaaagatgccggaggggaacgcatctggtatatcgca
gatgcctttcgtgcggggctctcattagacgcagtctttgatctcaccgaaattgattcc
tggtttttgatgcagattcaggaactcgtccagctcgaagaacagctgactcaaaccggc
attcaatccttagacgcgttttttttaaggcatcttaaacgaaaaggattttcggatgca
cgtttggccaaattactggccgtacccgaaaaagaaatacgagaccgacgccaccaatcg
aatttgcatcctgtttataaaagagtggatacctgtgctgcggaatttaggacagatacg
gcctatttatactctacctatgaagaagaatgtgaagccagacccaatcacgaacagaaa
aaaatcatgatattaggaggaggacctaatcggattggccagggaatcgaatttgattat
tgctgtgtgcacgcatctttagctcttcatgaggcgggatatcagaccattatggtcaat
tgcaatccagaaaccgtttcgacggattatgacatttctgatcgcctgtattttgaatcc
gtcacgctggaggatgtccttgaaatagtgcggattgaacaaccacaaggggttattgtt
caatatggtgggcaaacgcctctgcgcttggctcgagagcttgaagcggcaggcgtcatt
attttgggaacgagccctgatgcgattgatagggtagaagatcgtgaacgttttcagcaa
gccgttcatcgcttaggcttgaaacagcctgagaatgcgacggcccaaacacttgaagac
gcttttttaaaagctgaccttttaggttatccgctggtggttcgcccctcttatgtcctc
ggggggcgcgcgatggaaatcatttacaacagggttgacttgcagcgttattttcaaaat
gcggttcaggtttctaatgattcgcctgtattactggatcgttttttagatgatgcagtt
gaagtcgatgttgatgccatctgcgatggtgagcacgttttcatcggtggtattatggaa
cacatagaagaagcaggggtacattctggcgactcggcctgctcactgccggcttatacc
ttaaacgagcctattcaaaaatgtatgcgggatcaggtgacaaaactagcgtttgaactc
ggtgttaaagggttaatgaatgtccagtttgctgtcaaaaaagaacagctgtatctgatt
gaagtcaatccgcgtgctgcccgcacggtgccttttgtctccaaggcgacgggcatcccc
ttagcaaaaatagcggcgaaagtcatggcagggcagtcattagttcagcaaaatatgtta
aatgaaatcattcctccttattattctgttaaaaaagtggtcctgccctttgataaattt
cctggcgtggatcccatcttggggccagaaatgcattccacaggtgaagtgatgggggtt
ggacatactttcgcagaagcattcgcaaaagcaatgttggggagtcattcatcaatgaaa
aaaacagggcgagtcttgctttctgttcgagatggcgacaaaacacgagtggttgatttg
gcaaaacaatttttacaacaaggttttgagttagatgcgactcaagggaccgcggatgtt
ttagaaaaagcggggttgcctgctcgacgggtccataaagtgcatgaaggtcgccctcat
attcaagaccgcattaaaaatggagagtacatttatatcgtcaacactacctcagggcgc
caagcgattgaggattctaaattaattcgcagagccgcattacaatacaaagtgcattat
gatacgactctcaatggtgggctagcgactgtgatgtctcttatggaaaatccgattgaa
aaggtgatctcccttcaggaattgcatgccagttttataaggtga
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