Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0142
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Entry
HDEF_0142 CDS
T00911
Symbol
sseC
Name
(GenBank) type III secretion translocon protein
KO
K15345
secreted effector protein SseC
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hde02000
]
HDEF_0142 (sseC)
Transporters [BR:
hde02000
]
Other transporters
Pores ion channels [TC:
1
]
HDEF_0142 (sseC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ACQ66915
UniProt:
C4K8S8
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Position
complement(145050..146849)
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AA seq
599 aa
AA seq
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MILKNHTSQTEAVNSLEKQLKNQSLAPHERQEIISNLLPHIKNFFNHSNTKNDKAISQRS
AIKKSSIELKDKIPTALDAIKGANHLLDSISDFCNLSHVSDLMGASPEKAKEAIKMTLYQ
LHSLGKDLDSFSSNKDLVNLFSRLKTLHSNLLLLQNTPDFSVNNNHDAYLNFGNNIINNN
LSFQNIMIAVFLHYQQVVINNMSSQNQQDRDNLKHQKLLIDYEHQKLVDMIHQQQEQIKK
NEERSWWDKLIDVIVNVVQVIIGVVEVCIGDEVSGAANILAGACGLAKDLCQILEACHIG
NKEAEDKAIEVLTGLSTFFQFVALMTDMFSVLYKPAKLLKEGAVKLIRKGGSDALADAAK
VGSSRLAEAAAEGMEKKGIKLLEERMEKQLGKEAEEFIENLSERFNFNPEEGGIELKNMA
SGEGEEAEFAFEDINAKPKNIQKNIDRATEFFEKSKKQIINRIKQNVMKAAKQAAKDGEE
ITQEAINQIILMSVSKEIEKTAFRSFRFAGYRAAQAFVEASKLTFDGIIEWQVTGLTYEQ
EKDAAEREISKNEVDNTKKRTELNQKNQQNEVKFLQAEQQETIKSLQQVGQLNDLIMGG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttgatattaaaaaatcatacatcgcaaactgaagcagtcaactctcttgagaaacaatta
aaaaatcaaagtttggccccacacgaacgacaagaaatcatctccaatttattgcctcat
ataaaaaacttttttaatcattcaaatactaaaaacgataaagcaatttcacaaagatct
gcaataaaaaaatcttcaatagaattaaaagacaaaatccctactgcacttgatgcaata
aaaggggcaaaccatttgctcgattctatttcggatttttgcaatctttcccatgtttca
gacttaatgggtgcttcccctgaaaaggcaaaggaagccatcaaaatgactctttaccaa
ttgcattctttaggtaaggatcttgattctttttcttctaataaggatctggttaatctt
ttttcccgtttaaaaacacttcattcaaatttactattacttcaaaacactcctgatttc
tctgttaataacaaccatgatgcgtatttaaatttcggaaacaacattataaataacaat
ttgagttttcaaaatataatgatcgccgtctttttgcattatcaacaagttgttataaat
aatatgtcatcacagaatcaacaagacagggataatcttaaacatcaaaaattattaata
gattatgagcaccaaaaattggtagatatgattcatcaacaacaagaacaaattaaaaaa
aatgaagaaagaagctggtgggataaattaatagacgttatcgttaatgtggtccaggtt
atcattggtgtagtagaagtttgtatcggagatgaagtctctggtgcggctaatattctt
gcaggtgcgtgcggtttggcaaaagatttatgtcaaattctggaagcctgccatattggt
aataaggaggcagaagataaagcaattgaagtcttaacgggtttatcaacgttttttcag
tttgttgcactaatgactgatatgttttctgttctctataagcccgctaaattactaaaa
gaaggtgcagtaaaactcatcagaaagggaggtagtgacgctcttgcagatgctgctaaa
gttggatcatcccgattggctgaagccgccgcagaaggcatggagaaaaaggggatcaaa
ttacttgaagagagaatggaaaaacagcttggaaaagaagcagaagagtttatcgaaaat
ctttctgaaaggtttaactttaacccggaggaaggaggaattgagctgaaaaatatggcg
tcgggtgagggtgaagaggctgaatttgcattcgaggacattaatgctaaaccaaaaaat
atccaaaaaaatatcgatcgagcaacagaattttttgaaaaatcaaaaaaacaaatcata
aaccgcattaagcagaacgtaatgaaagccgctaagcaagccgccaaagatggagaagaa
atcacacaagaagcaatcaatcagattatattaatgtcagtatctaaagaaatcgaaaaa
acggctttcagatcattcagatttgcagggtatcgtgcagctcaagcctttgttgaagca
tcaaaattaacatttgacggtatcatagaatggcaagtcacaggcttaacatacgaacag
gaaaaagacgctgcagaaagagagatttctaaaaatgaggtcgataataccaaaaaaagg
acagaactaaaccaaaaaaatcagcaaaatgaagtgaaatttcttcaagcagagcagcaa
gaaaccattaaatcgttacagcaggtggggcagctgaatgacttaataatgggtgggtaa
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