Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0276
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Entry
HDEF_0276 CDS
T00911
Symbol
rtxB_1
Name
(GenBank) putative ABC RTX toxin transporter, fused ATP binding/permease domains
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDEF_0276 (rtxB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hde02000
]
HDEF_0276 (rtxB_1)
02044 Secretion system [BR:
hde02044
]
HDEF_0276 (rtxB_1)
Transporters [BR:
hde02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HDEF_0276 (rtxB_1)
Secretion system [BR:
hde02044
]
Type I secretion system
RTX toxin transporter
HDEF_0276 (rtxB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_21
AAA_29
AAA_18
AAA_30
KAP_NTPase
RsgA_GTPase
GbpA_2
Tmemb_9
AAA_14
CoaE
Vta1
MeaB
nSTAND3
Rad17
AAA_28
SbcC_Walker_B
nSTAND1
AAA_25
PRK
AAA_5
APS_kinase
NB-ARC
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ACQ67041
UniProt:
C4K398
LinkDB
All DBs
Position
complement(275336..277450)
Genome browser
AA seq
704 aa
AA seq
DB search
MANHKKSSVPSLLALARGAACFDLAIESAQLEHKLGLPIEKIDDIALCRCANWIGLRARR
IKQPVARLNTMPLPVLFSEGGNWYLLLNLNETHAVVYSPLSDNEGSISREQLNQLWSGKA
ILLAKAEKPAKKAAFGFGWFLPLILKHGRQLRNIVVISLLLQAILLVTPMLFETVIDKVL
VSRGIDSLIVLGMAMIGLAIAEPIYTFLRGWLFSNLSTRVGAELNTRLYRHLMSLPLNYF
SSRQTGQIIARVREMEQIRSFLTGSALTMLLDLFFVSTFIAVMFYYSVKLTSIVLISLCC
YLVFWLCVGKILQKRVEREYEESANATSFLTEVITGLETIKTTTTEKQFNRQWQQYLANF
VRSAFNTKQVGNLAGQGISLIYKITSALLLWYGVQLALEGKLSPGELVAFNMFSGYVTQP
ILRLAQIWQDLQHTKIALKRIGTILDSPSEPGNSGLVSSAQSAGRIAFKQVRFRYSQDTP
EILQNLNISIKSGEFVGITGPSGSGKSTLTKLLQRLYTPQSGQILVDGQDLAITDPTALR
RRMSVVLQESILFSGTIQENICQCRPNADMEEVEKVARLAGAHDFIMGLAQGYETQVGEK
GGMLSGGQRQRIALARALMADPQILILDEATSALDYESEAAIMRQLPEITRNRTVICIAH
RLNTLRGCDRILLLKEGVVHEEGTHSELVEQSGHYARLWALQTT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccacaaaaagtccagcgttccttctttactggcgcttgcaaggggagccgct
tgctttgatttagcaatagagtctgcccagttagaacataagttgggtttgccgatagag
aaaatagacgacatcgctctttgtcgatgcgcaaattggattggacttcgagcacgtaga
attaaacaacctgtcgctcgattaaacacaatgcctttacctgttttattttcagagggg
ggaaattggtatttattattaaatctgaacgaaactcatgccgtcgtttactctcctctt
tctgataacgaggggagtatctctcgtgagcagctcaatcagttatggtcagggaaagcc
atcttattggcaaaagcagaaaagccagccaagaaggcagcttttggttttggctggttt
ttacctttgattctgaaacacggtaggcagttacgcaatattgttgttatttctctatta
ttacaggccatacttttggtgactcctatgctgtttgaaacagtcattgataaggtgttg
gtcagtcgtggtatagatagcctgatcgtattaggtatggcgatgataggattggctatt
gctgaacctatttatacttttttgcgaggctggctattttcaaatctttctactcgagtt
ggagctgagcttaacacccgtctttatcgtcatctgatgagtttacctttaaactatttc
agcagcagacaaacggggcaaattattgccagggtccgtgagatggagcaaattagaagc
ttcctgacaggatcagccttaaccatgttattggatttattttttgtcagcacctttatt
gcagtcatgttttattacagcgtcaagttgacttcaattgtattgatatccttgtgctgt
tacctggtattttggctgtgtgtggggaaaattttacaaaaaagagtcgaacgtgaatat
gaagagagtgccaatgccacttcttttttaaccgaggtgatcacgggtcttgaaaccatt
aaaaccacgacaacagaaaaacaattcaaccgtcagtggcaacaatatttagcgaatttt
gttcgttcggctttcaataccaaacaagtgggtaatttagcaggccagggcattagttta
atttataaaataacctccgctttattactttggtatggtgttcagctcgcgttagaaggc
aaattgtcccctggtgagttagtcgcatttaatatgttttcgggttacgtcacccagccc
atattacgtttagcccaaatttggcaagatttgcaacatacaaaaattgcattaaagaga
attggcaccattttagatagcccaagtgaacccggtaattcaggtttggtttcatctgct
cagagtgcaggtcgtatcgcttttaaacaggttcgttttcgatattctcaggacacacca
gagatactacaaaatttgaatatatccataaaaagtggtgaatttgttggaataacaggg
ccttctggttctgggaaatctaccctgaccaagttattgcaacgtttatacacaccacaa
agcggtcaaattttagtcgatggacaagacctggcaatcacagatccaaccgctttacgc
cgcagaatgagtgtggttttacaagaaagcatcttattttctgggacaatacaggagaat
atctgtcagtgtcgacctaatgctgatatggaagaagtagaaaaagtcgcccgtttggcc
ggcgctcatgattttatcatgggcttagctcaggggtatgaaacacaggtgggtgaaaaa
ggcggcatgctttctggtgggcaacggcaacggattgcgttggcaagagcattaatggcg
gatcctcaaattttaattttagatgaagcgaccagtgccctagattatgaatcagaggcg
gctattatgcgtcaactgcctgaaattactcgcaatcgtaccgttatttgtattgcccac
cgtctcaataccttacggggttgtgatcgtattttgttgctaaaagaaggggttgttcac
gaggaaggcactcacagcgaactggtggaacaatccggccattatgcgcgtttatgggcg
ctacaaaccacttaa
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