Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0315
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Entry
HDEF_0315 CDS
T00911
Name
(GenBank) hypothetical protein
KO
K02282
pilus assembly protein CpaE
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDEF_0315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hde02044
]
HDEF_0315
02035 Bacterial motility proteins [BR:
hde02035
]
HDEF_0315
Secretion system [BR:
hde02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HDEF_0315
Bacterial motility proteins [BR:
hde02035
]
Pilus system
Pilus assembly proteins
HDEF_0315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4365
Motif
Other DBs
NCBI-ProteinID:
ACQ67077
UniProt:
C4K3D4
LinkDB
All DBs
Position
complement(325588..326721)
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AA seq
377 aa
AA seq
DB search
MSLFLSKNSIHSQNNQRPSENLVAILSKNTELSGKISEQVYLSGIQNIKEMSLDFSELTH
VDFPDALSGVILDIGSHKDVDFILNFVQRQIPSGAWCVLIGSNDSIRVAQQFTEQGLLYL
HADSQITELTQHLIKGISIKKLRNSFLISVLGCRGGVGSSLLSYQLAQSINELKNSLILL
SQGKQGSQDIDLITESKIGNTVFNYQKNLDILFLGEKSISNIEENLQKKYHFIIFDQPIY
LFKREDLEKYINHSHVVVLVLDHSMTSVRVAKNFINIFERFKKNNQKSTRIITCVNENRP
KTKDMFAIPDIESLLERSIDIKIPYIKNAKNFVHSPYYYEKHKKNLLKLSQSILGLKDIP
FYLQKGWLTPFLKMIKK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctatttttaagtaaaaattcaattcattctcaaaataatcaacgcccaagtgaa
aatttggtggctattctttcaaagaacactgaattgagcggcaaaatttcagagcaggtt
tatttatctggtattcaaaatataaaagaaatgtctttagatttttctgagttgacccat
gtagattttcctgatgctctctcaggcgtgatattagatataggcagccataaagacgtt
gattttattttgaattttgttcaaagacagattccttccggggcttggtgcgttttaata
ggaagcaatgattctatccgtgttgcacaacaatttactgaacagggtttgttatattta
catgctgattcacagataacagagttgacacaacatcttataaaagggatttcaattaaa
aaactgagaaattcatttttaatcagcgtattaggctgtagggggggcgttggctcgtct
ttgctcagctatcagttagcacaatccatcaacgaattaaaaaattctttaatattatta
tcacaggggaaacagggatctcaggatattgatttaatcactgagagtaaaatcggaaat
actgtttttaattatcaaaaaaatttagatattttatttttaggtgaaaaatctatctct
aatattgaagaaaatttacaaaaaaaatatcactttattatatttgatcaacctatttat
ctttttaaaagagaagatttagaaaaatatatcaatcattctcatgttgttgtgttagtg
ctcgatcattctatgacatctgtcagggtggctaaaaactttattaatatttttgaacgt
tttaaaaaaaacaatcaaaaatcaactagaataatcacctgtgttaatgaaaatcgtcca
aaaacaaaagatatgtttgccataccagatattgaatctttactggaaagatcgattgat
atcaaaattccttatattaaaaatgcgaaaaattttgttcattctccttattattatgaa
aaacacaaaaaaaatcttttgaagttatcgcaatcaattctgggtttaaaagatattcct
ttttatttacaaaaaggctggctaacgccatttttaaaaatgataaaaaaataa
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