Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0332
Help
Entry
HDEF_0332 CDS
T00911
Symbol
nusA
Name
(GenBank) transcription pausing; L factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hde03021
]
HDEF_0332 (nusA)
03009 Ribosome biogenesis [BR:
hde03009
]
HDEF_0332 (nusA)
Transcription machinery [BR:
hde03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HDEF_0332 (nusA)
Ribosome biogenesis [BR:
hde03009
]
Prokaryotic type
rRNA transcription factors
HDEF_0332 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
RNA_pol_A_CTD
KH_KhpA-B
TfoX_C
MRP-S35
KH_2
Replicase
Motif
Other DBs
NCBI-ProteinID:
ACQ67094
UniProt:
C4K3F1
LinkDB
All DBs
Position
complement(344424..345908)
Genome browser
AA seq
494 aa
AA seq
DB search
MNKEILAVVEAVSNEKSLPREKIFEALESALATATKKKYDQDVEVRIKINRKTGDFDTFR
RWLAVDIVTSPTREITLEAAQFQDSQIQLGDYVEDQIESVIFDRITTQTAKQVIVQKVRE
AERAMLVEQFRQHQGKIVTGVVKKATRENIYLDLGNNTEGIIGREDMLPRENIRTGDRIR
GVLYDVRPEARGAQLFISRSRPEMLIELFRIEVPEIGEELIEIKAAARDPASRAKIAVKS
NDKRIDPVGACVGMRGARVQAVSTELGGERIDIILWDDNPVQFVINAMAPAEVVSVTIDE
DKHTMDIAVEATHLAQAIGRNGQNVRLASRLSGWELNVMTAEELQSKNQAEVDSIVHTFI
QHLNIDKEFAEVLIEEGLSSLEELVCVPIEELLEIEGLDEETVNALRDRAKKTLTTLALA
ENFSGNSPSDDLLNLPNMDSKIAFRLSASGISTLEDLAEQSIDDLADIEGLSNDKAGELI
MAARGICWFSDDNT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattttagctgttgtagaagccgtctcaaacgaaaaatctcttcctcgc
gaaaaaatttttgaggcattagaaagcgcactggcgacagcaacaaaaaaaaaatatgat
caagacgttgaagttcgtatcaaaattaatcgtaaaaccggtgattttgatacttttcgt
cgttggctcgccgttgatattgtgacatcacccacacgagaaatcactttagaagcggct
cagtttcaagattctcaaattcagctcggtgattatgttgaagatcaaattgaatctgtc
atttttgatcgaattacaacacaaacagccaaacaggtcatagtacaaaaagtcagggag
gctgagagagcgatgctcgttgagcagtttcgtcaacatcaggggaaaattgtcaccggc
gtagtaaaaaaagcgactcgtgaaaatatttatcttgatctgggcaataataccgaaggc
attattggtcgtgaagacatgttgccaagagaaaatattcgtacaggtgatcgtattcgt
ggtgttttgtatgatgttcgtcctgaggcaagaggggctcaattgtttatcagtcgttca
cgcccagaaatgctgatagagttatttcgtattgaagtccctgaaattggcgaagaattg
attgaaatcaaagccgctgcgagagatcctgcttctagagcgaaaattgcagtaaaaagt
aatgataaacgtattgaccctgtgggcgcttgtgtaggaatgagaggggctcgtgtgcaa
gctgtttccactgaattgggcggtgaacgtatcgatattattttatgggatgataatcct
gttcagtttgtcattaacgcaatggcacctgcagaggtggttagtgtcaccatagatgaa
gataagcatacaatggatattgctgttgaagctactcacttggctcaagcgattggacgt
aatgggcaaaatgtgcgtttggcttcacgactcagtggttgggaattaaatgtgatgacg
gcagaagaactgcagtcaaaaaatcaagctgaagtcgactctattgtacatacttttatt
caacaccttaatattgataaagaatttgctgaagttttaattgaagaaggtttgtcttct
ttagaagaattggtttgtgtccctattgaggagctattagagatagaagggcttgacgaa
gaaacggttaatgcattgcgtgatcgagccaaaaaaacattaaccacccttgccttggca
gaaaattttagtggtaactccccctctgatgatttattaaatttacccaatatggattct
aaaattgcctttagattatctgcatctggcatatccacactggaagatctggctgagcag
tctattgacgatttggctgatattgagggtctgagtaatgataaggccggtgagctgatt
atggctgcccgtggaatttgttggtttagcgatgataatacctaa
DBGET
integrated database retrieval system
