Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0455
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Entry
HDEF_0455 CDS
T00911
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HDEF_0455 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_0455 (ung)
Enzymes [BR:
hde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HDEF_0455 (ung)
DNA repair and recombination proteins [BR:
hde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HDEF_0455 (ung)
Prokaryotic type
HDEF_0455 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACQ67209
UniProt:
C4K3R6
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All DBs
Position
complement(459178..459855)
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AA seq
225 aa
AA seq
DB search
MAMPASLLTWRDVIGAEKKEFYFKDTLASVAAERRSNKMIYPSPENVFNAFRLTEFGEVK
VVIIGQDPYHGPNQAHGLSFSVLPGIVLPPSLVNIYKELLNDIIGFVYPNHGCLENWAKQ
GVLLLNTVLTVEAGRANSHAHLGWGIFTDRVIAALNQHNHRIIFLLWGSHAQKKGEIIDT
QRHFILKAPHPSPLSAHRGFFGCKHFSKTNQLLEQQGLAPISWQP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccagcttctcttctcacctggcgtgatgtcataggcgcagaaaaaaaagaa
ttttattttaaggatactttggcctctgtagctgccgaacgtcgttcaaataaaatgatt
tatccctctccagaaaatgtatttaatgcctttcgtttaacggaatttggagaggtaaaa
gtcgtgattattgggcaagatccctatcatgggcctaatcaggcacatggtttatctttt
tctgttttaccaggtattgttttgccgccttccctggtgaatatctataaagagctgctc
aatgacattataggttttgtataccctaatcacggttgtttagaaaactgggcaaaacaa
ggggttttattgctgaatactgttctgacagtcgaagcggggcgagcgaactctcatgcg
catcttggctggggtatttttactgatcgtgtgattgcagctctgaatcagcataatcat
cggattatttttttactctggggttctcatgcacaaaaaaaaggagaaatcattgatact
cagcgtcattttattttaaaagcgccgcatccatcgcctctatctgctcatcgaggattt
tttggatgcaagcatttttcaaaaacgaatcaactgttagaacagcagggattagcacct
atcagttggcaaccctaa
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