Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0480
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Entry
HDEF_0480 CDS
T00911
Symbol
lysS
Name
(GenBank) putative lysyl-tRNA synthetase with Class II aaRS and biotin synthetase domains
KO
K04568
elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hde03012
]
HDEF_0480 (lysS)
Translation factors [BR:
hde03012
]
Prokaryotic type
Elongation factors
HDEF_0480 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA-synt_2d
tRNA-synt_2b
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACQ67234
UniProt:
C4K3U1
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All DBs
Position
complement(482387..483364)
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AA seq
325 aa
AA seq
DB search
MSEAANWQPSAPISNLLKRADMIKKIRQFFTDRGVLEVDTPCMSQATVTDVHLSTFETRF
LAPTMAKSLSLYMTTSPEYHMKRLLAAGSGPIYQMGRCFRNEEMGRYHNPEFTLLEWYRP
HYDMYRLMDEVDDLLQQILTCHSAETLSYQQAFLRHLNIDPLSADETQIKEAAVRLNLAS
ITDNEKDRDTFLQLLFMAGVEPYIGRDKPVFIYHFPASQAALASISTEDYRVAERFEVYF
KGIELANGFYELTDSAEQQQRFEQDNRQRAALGLPKRSIDERFIAALKHGLPPCSGVALG
IDRLVMLSVNAENLSEVMAFPVERA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcggctaactggcagccaagtgctcctatttccaatttattaaaacgcgcc
gacatgatcaaaaaaattcggcaattttttactgaccggggtgtgttagaggttgatacg
ccctgtatgagccaagcgacggtcacggatgtacatttgtccacttttgaaacccgcttt
ttagctccaacgatggctaaaagcttgtcgttatatatgacgaccagtcctgaatatcat
atgaaacgccttcttgctgcagggagcggcccaatttatcagatggggcgatgttttcga
aatgaagaaatggggcgttatcacaatcctgagtttactttattagaatggtaccgacct
cattacgatatgtatcgtctaatggatgaagtggatgatttactgcagcaaatattaacc
tgtcattctgcggagacactttcttatcagcaggcatttttacggcatttgaatatagat
cccctttctgctgatgaaactcagattaaagaggctgctgtgaggctgaatcttgcctct
attactgataacgaaaaagatcgtgatacttttttgcaattgctttttatggctggagtc
gagccttatattgggcgtgataaacctgtctttatttatcattttcctgcttctcaagcc
gccctggcaagcatcagtactgaagattatcgcgttgcagagcgttttgaggtgtatttc
aaagggattgaattagcgaatggtttttatgaattaacagatagtgccgagcaacaacag
cgttttgagcaggataatcgtcagcgtgctgctttaggcttgcctaaacgttcaattgat
gagcgttttatcgctgctctcaagcacggattaccgccttgctcaggcgttgcattaggg
attgaccgtcttgttatgttgtcagtgaatgcagaaaatttaagcgaggtcatggctttt
cctgttgaaagagcttga
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