Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0488
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Entry
HDEF_0488 CDS
T00911
Symbol
clpB
Name
(GenBank) ATP-dependent protease, Hsp 100
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hde03110
]
HDEF_0488 (clpB)
Chaperones and folding catalysts [BR:
hde03110
]
Heat shock proteins
HSP100
HDEF_0488 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
AAA_14
bpMoxR
IstB_IS21
NBD_SMAX1
AAA_7
AAA_28
AAA_19
ATPase_2
AAA_23
AAA_24
AAA_18
NACHT
AAA_25
DUF815
CEP76_N
TF_AP-2
Motif
Other DBs
NCBI-ProteinID:
ACQ67242
UniProt:
C4K3U9
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All DBs
Position
490036..492609
Genome browser
AA seq
857 aa
AA seq
DB search
MNLDNFTNQFQSAFSEAQSLALGKNQQFIEPVHMMKALLNQDTGTVRPLLVATGVDINRL
NAELDKALSDLPVVEGIGGDVRLSNASIRILNICNKLAQQRGDKYISSEWFILAALQERG
ALKEIMKSCGISEQPVKQEIERLRSGDNVNDQGAEDHRQALKKFTIDLTERAEQSKLDPV
IGRDEEIRRAIQVLQRRTKNNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKKKRVLSL
DMGALLAGAKYRGEFEERLKGVLKDLSKQGGSVILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVYVAEPTVEDTIAILRGLKERYELH
HHVQITDPAIVAAASLSQRYIADRQLPDKAIDLIDEAAASIRMQIDSKPEALDKLERRII
QLKLEQQALNKEQDEASKKRLKMLNDELEKKERQYSELEEEWKAEKASLTGTQNIKAQLE
EAKITLEQARRVSDLAKMSEMQYGKIPALEKQLQAATEKEMSSMKLLRNRVTDIEIAEVL
ARWTGIPVDRMLESEREKLLRMEENLHQQVIGQNEAVIAVSNALRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKALAYFLFSSKDAMVRIDMSEFMEKHTVSRLLGAPPGYVGYEQGG
YLTEAVRRRPYSVVLLDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GSDLIQERFSQADYSDMKKSVMEVVRRYFRPEFINRIDEVVVFHPLEAQHLESIAQIQLK
QLYQRLEEKGYTAGITPSALGFLTKEGYDPVYGARPLKRAIQQEIENPLAQQILSGQLIP
GMPIVLDLNEGHILARQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggataattttaccaatcagtttcaatccgctttttcggaggcgcaatcttta
gcactgggtaagaatcagcagtttattgagcctgtgcacatgatgaaagccttgctaaat
caagacactggaacggttcggccattgctggtcgcaacaggtgttgatatcaaccggtta
aatgcagagcttgataaagccttatccgatttacctgttgtcgaaggcatcgggggtgat
gtgcgattatcgaatgcttctatacgcatcttgaatatttgtaacaagttggctcaacaa
agaggagataaatatatttcctcagaatggtttattcttgctgccctccaagagcgaggg
gctttaaaggaaattatgaaatcttgtgggatttcagaacaacccgtgaaacaagaaatt
gagcgcttacgctcaggggataacgtcaatgatcaaggtgccgaagatcatcgccaggct
ttaaaaaaatttacgattgacctcactgagcgggcagaacaaagcaagctggatccggtg
attggtcgggatgaagaaattcgtcgggccattcaggttttacaacggcgtacaaaaaat
aatcccgtgttgataggcgcgcctggtgtcgggaaaaccgccatagtagaagggttggcc
cagaggatcgtcaatggagaagtgcccgaagggctcaaaaaaaagcgagtattgtcgctt
gatatgggggcattattggcaggggcgaaatatcggggggagtttgaagaacggctcaag
ggtgtgcttaaagatttatcgaaacaagggggaagcgtgattttgtttatcgatgaattg
cacactatggttggggcgggtaaagcagaaggcgcgatggatgcaggcaatatgttaaaa
cccgctttggcaagaggagaattacattgtgttggggcaacaaccttagacgaatatcgg
caatatatcgaaaaagatccggccctagagcgccgctttcaaaaagtgtatgtggctgag
ccgacggtagaagacacgattgccattttgcgaggtctgaaagagcgttatgaattacat
catcatgtccagattaccgatcctgcgattgtggccgctgcgagcttgtctcaacgctat
atcgcagatcgtcaattaccggataaagccatcgatttgattgatgaagcggcggcaagc
attcgtatgcaaatagattcaaaacctgaagcattggataaattagagcgtcgtattatt
caattaaaactggaacagcaagcactaaataaagagcaggatgaagccagtaaaaaacga
ctcaaaatgcttaatgatgaactagaaaaaaaagaacgacaatattctgaactggaagaa
gaatggaaggctgaaaaagcctctttgacgggaactcaaaatattaaggcacaactcgaa
gaagcaaaaattacactggagcaagcgagacgggtgtcagatttagcaaaaatgtcggag
atgcaatatggcaaaatccccgccctggagaagcagttgcaggcggcgaccgagaaagaa
atgagtagcatgaaattattacgcaatcgagtgaccgatattgaaattgccgaggtgctg
gcacgttggacagggatccccgttgatcgaatgttagaaagcgagcgtgaaaaattatta
aggatggaagaaaatttacatcaacaggtgataggccaaaatgaagcggtcattgcggtg
tcgaatgcgttacgacgtagtcgggcgggtttatcggatcctaaccgtccgatcggttcg
tttttatttttgggcccgacgggcgtagggaaaacagaactatgcaaagcgttagcgtat
tttttattttccagcaaagacgccatggtgcgtatcgatatgtcggaatttatggaaaaa
cacacggtatcgcgcttgttgggtgcacccccaggatatgtgggatatgaacaagggggg
tatttaaccgaagccgttcgtcgccgcccttattctgtagtattgctcgatgaagtagag
aaagcccatcaggacgtgtttaatattttattacaagtattagatgatggacgattaaca
gatggtcaaggtagaacagtcgattttagaaacacggtcatcatcatgacttcaaatcta
ggctccgatctgattcaggaacgcttttctcaagccgattatagcgacatgaaaaaatcg
gtgatggaggtggtccggcgttactttcgtcctgaatttattaacaggattgatgaagtc
gtggtatttcatccattagaagcacagcatcttgagtctatcgcgcaaattcagctcaag
cagttatatcaacgcctcgaagaaaaaggctacacagcgggaatcactccaagcgctttg
ggctttttaacaaaagaaggatacgaccctgtttatggtgcccgacctttaaaacgtgct
attcaacaagaaattgaaaatcctttggcacagcaaatattatcaggccagttaatacct
ggtatgcctattgttttagatctgaatgaaggacacatccttgcaaggcagtaa
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