Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0504
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Entry
HDEF_0504 CDS
T00911
Symbol
priA
Name
(GenBank) primosomal protein N' (factor Y) directs replication fork assembly at D-loops, ATP-dependent
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HDEF_0504 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_0504 (priA)
Enzymes [BR:
hde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HDEF_0504 (priA)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDEF_0504 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
PriA-like_WH
ResIII
Helicase_C
AAA_30
PriA_CRR
SpGH101_helical
Zeta_toxin
AAA_19
zinc-ribbons_6
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACQ67258
UniProt:
C4K3W5
LinkDB
All DBs
Position
503688..505892
Genome browser
AA seq
734 aa
AA seq
DB search
MLIVKIALPIPLNRTFDYCLAMNMPHPAIGARVKVPFGHRKAIGIVTSLSQSSAVSLEKL
KNIEAILDDQSLFSDSLWQTLYWASQYYHYSIGEVLFHAIPLLLREGKQAKFEPVLHWVA
TEKGQTISIDALHKAPKQQKAMNQLLQGPIYHHEVNSLGFTQNTFQALQKKGLSLLCAQE
IQSSDWRSKIKKMKGENRLQLNSEQIEAIKRIHHQNKQFVVWLLAGVTGSGKTEVYLRVL
ENLLIEGRQALVLVPEIGLTPQIVDRFRERFDVPIDVLHSGLNHKQRLSVWLKARSGEVA
IVIGTRSALFTPFAQLGIIVIDEEHDGSYKQQEGWCYQARDLAVFRAKKENIPIVMGSAT
PALETLRNVELGKYQKLVLSQKAVQTQLVKQKFIDIKGLPLTSGLCQPLLKKMQQHLQAN
NQVMLFLNRRGYAPVLLCHECGWIAECLHCDHYYTLHQNSQKLRCHHCNRQSQLLSQCPR
CDSTHLMPVGVGTEQLESTLLSLFPNVPITRIDRDTTRKKGVLEKYLSHIHEGGARILIG
TQMLSKGHHFSDVTLVGLLDVDGALFSSDFRAAERFSQLYIQVAGRAGRAKKAGEIFLQT
HHPEHPLLQTLLGKGYDAFAKEALEERKKALLPPYTYHIIIRSQDNDNEQAPIFLQRVRD
IFESDSLKDTDLWVMGPVPALFSKRNGRFQWQLLLQHPSRKQLQQLVNRCNPLLLSLALN
QKIRWSLDVDPTES
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgtaaaaattgctcttcctatccctttaaatcgtacatttgattattgttta
gcgatgaacatgcctcatcctgccataggtgcacgtgtcaaagtgcctttcggtcataga
aaagcgataggtattgtgaccagtttgagtcaaagcagcgctgtttctctggaaaaattg
aaaaatattgaggcaattttagatgatcaaagtttattttcagacagcctttggcagacg
ctgtattgggcatctcagtactaccattattctatcggtgaagttctttttcatgcgatt
cctttgttgttaagggaaggaaaacaagcaaaatttgaacctgtattacattgggtggcg
accgaaaagggccaaactatttcaatcgatgctttacataaagcgcccaaacaacaaaaa
gcgatgaatcaattattacaaggccctatctatcatcatgaagtgaattccttaggtttt
actcaaaatacttttcaagctttgcaaaagaagggattgagtttactttgtgctcaagaa
atccaatcttctgattggaggagcaaaattaaaaagatgaagggagaaaatcgtttacaa
ctcaattctgaacaaattgaagcgataaaacgtattcatcatcaaaataagcaatttgtg
gtatggcttttagcgggagtgacggggtcagggaaaacagaagtctatctgcgtgtatta
gaaaatcttctgattgaaggccgacaagcgcttgttttggtaccagaaattggtttaaca
ccgcagatcgttgaccgtttccgtgaacgctttgatgtccctattgatgttctacattcg
ggtttgaatcataagcaacgactctcggtctggctgaaggcccgtagtggtgaagtcgcc
atagtgattgggacacgttccgcgttgtttacaccttttgcacagcttggcatcattgtt
attgatgaagagcacgacggttcatataagcaacaggaaggttggtgttatcaggctcgt
gatttggcggtatttcgtgcaaagaaagaaaatatcccgatagtgatgggatcggcaacg
cctgctttagaaacgctgcgtaatgttgagcttggaaaatatcaaaaattggtcttatct
caaaaagccgttcagactcaacttgtcaaacagaaattcattgatatcaaaggattacct
ctgacctcgggtttatgtcagcctttactaaaaaagatgcaacaacatttacaggcaaat
aatcaggtgatgctgtttttaaaccgtcgtggttatgcccccgttttactgtgccatgaa
tgtggctggattgctgaatgtttacactgtgatcattattataccctacatcagaattca
cagaagctacgttgtcatcattgtaataggcagagtcagttgttatcacaatgtccccgc
tgtgattctacgcatcttatgcctgtcggagtgggtacggagcagctagagagcacattg
ctttctctttttcctaatgtcccgattacgcggattgatcgtgataccacgagaaaaaaa
ggcgtattggaaaaatatttgtcccatattcatgaaggaggggctcgcattctgattggg
actcaaatgttatcaaagggccatcatttttctgatgtgacattggtgggtttgttggat
gtcgatggggctttattttcatctgacttccgtgcagcagaacgtttttctcaactttat
attcaagtggcagggcgcgcagggcgcgctaaaaaagcaggggaaatatttttacagacg
catcaccctgaacatcctttactgcaaacgttactgggaaaaggttacgacgcgttcgct
aaagaagccttggaagaaagaaaaaaagcattattacctccttatacttatcacattatt
atccgaagtcaggacaatgataacgagcaagcgcctatttttttgcaacgggtacgtgat
atattcgaatcagactcattaaaagacacagatctttgggtaatggggccggttcctgct
cttttttctaaacgcaatgggcgttttcagtggcaattattattgcaacatccttcccgg
aaacaattacaacagcttgtcaacagatgcaatccactgctgctttctttagcactcaat
caaaaaataagatggtctttggatgttgatccaacagaaagttga
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