Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0604
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Entry
HDEF_0604 CDS
T00911
Symbol
rsmE
Name
(GenBank) 16S rRNA methyltransferase
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hde03009
]
HDEF_0604 (rsmE)
Enzymes [BR:
hde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
HDEF_0604 (rsmE)
Ribosome biogenesis [BR:
hde03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HDEF_0604 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ACQ67345
UniProt:
C4K452
LinkDB
All DBs
Position
complement(587086..587817)
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AA seq
243 aa
AA seq
DB search
MRIPRIYHPYPFFAHTQIELSEEAAHHVIRVLRMKPGQSLYLFHDSNDIIQANIIRIDKK
KVYVQLKEAILKNNESPLYLHLGQVICRSEKMEYTLQKSVELGVHSVTPLFSERCGVKID
GERLQKKIQQWKKIAISACEQCGRNKIPKIYNALPLHNWCAHQDNSLKLNFVPKANNRIN
TLIPPVSRVRILIGPEGGLSNDEIAMAADYEFLPISLGPRVLRTETTALTAITALQVRFG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcctcgtatttatcacccatatcctttctttgctcacacacaaattgagttg
agcgaggaagccgctcatcatgtcataagggttttacgtatgaagccagggcagagcttg
tatttatttcatgatagtaatgatattattcaggcaaatattattcgtatagataaaaaa
aaagtgtatgttcagctgaaagaagccatactaaaaaataatgaatctccgttgtattta
catttaggccaagtgatttgtcgctctgaaaaaatggaatacacacttcaaaaatcggtg
gaattaggtgtgcattcggtcactccgttgttttcggaacgctgtggtgtcaaaatagat
ggagagcgtttacaaaaaaaaattcagcaatggaaaaaaatcgcgatttcagcgtgtgaa
caatgcggacgtaataaaattccaaaaatctataatgcgcttccacttcataactggtgt
gcacaccaggataatagcttaaagttaaattttgttcctaaagcaaataaccgcattaac
actttaattcctcctgtcagccgtgtccgaattttgattggtccggaaggagggctctcc
aacgacgagattgcaatggccgccgattatgagtttttgcccatttcattaggtcctcgg
gtcttacgtacggaaaccaccgctttgactgcaatcacagcgctacaagttcgttttggt
gatttaggctaa
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