Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0699
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Entry
HDEF_0699 CDS
T00911
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00300
Lysine biosynthesis
hde00470
D-Amino acid metabolism
hde01100
Metabolic pathways
hde01110
Biosynthesis of secondary metabolites
hde01120
Microbial metabolism in diverse environments
hde01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HDEF_0699 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDEF_0699 (dapF)
Enzymes [BR:
hde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HDEF_0699 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACQ67432
UniProt:
C4K4D9
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All DBs
Position
687934..688770
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AA seq
278 aa
AA seq
DB search
MRFSKMCSLGNDFVIIDAVTQNVHLRSEFICRLANRHTGIGFDQLLLLEPPNSPELDFHY
RIFNADGSEVFQCGNGARCLGRFVHLKGLTNKKNIQVSTKTVKMQIHLEEKNQICVNMGE
PDFFPQTIPFRSKTIKKIYELDVAEQKLLCGIVSMGNPHCIIQVEKLDSDQIKLIGPLLG
CHPSFPEGTNVGFMQIIDRKHIHLRVYERGAGETQACGSGACAAVSIGVQQDLLDEKVHV
EQKGGNLDICWKGTGHCLYMTGPADHVYDGVIHMSFKP
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcggttttcaaaaatgtgcagcctgggtaatgattttgtcatcattgatgctgtaacc
caaaatgttcatctacgatcagagtttatctgtcgattagcgaatcggcatactggtatt
ggttttgatcagctattgttgctggaacctcctaatagtccagaattggattttcattat
cgtatttttaatgcagatggtagtgaagtatttcaatgtggtaacggtgctcgttgcttg
gggcgttttgttcacttaaaaggcttaacgaataaaaaaaatattcaggtgagtaccaag
accgtaaaaatgcaaattcatctagaagagaaaaatcaaatttgcgttaatatgggtgag
cctgattttttccctcaaactatcccttttcgttcaaaaacaataaaaaaaatttatgaa
ttagatgtcgctgaacaaaaactactttgtgggattgtgtctatgggtaatccacattgt
attatacaggtggaaaagcttgactccgatcagattaaattgattggccctttattgggg
tgccatccgtcttttcccgaagggacaaatgtcggatttatgcaaatcattgatcgaaag
catattcatctgcgcgtttatgaacgtggcgctggagaaactcaggcctgcggcagtggg
gcttgtgctgcagtctcgataggggttcagcaggatctgctggatgaaaaagttcatgtt
gaacaaaaaggaggcaatctcgacatctgctggaaaggaacaggccattgcctttatatg
acagggcctgcagaccatgtttatgacggagtaattcatatgagctttaagccatga
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