Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0700
Help
Entry
HDEF_0700 CDS
T00911
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03420
Nucleotide excision repair
hde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HDEF_0700 (uvrD)
03430 Mismatch repair
HDEF_0700 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_0700 (uvrD)
Enzymes [BR:
hde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HDEF_0700 (uvrD)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HDEF_0700 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HDEF_0700 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PcrA_UvrD_tudor
UvrD_C_2
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACQ67433
UniProt:
C4K4E0
LinkDB
All DBs
Position
688820..691015
Genome browser
AA seq
731 aa
AA seq
DB search
MDYSKLINTLNEKQRTAVTSSADHILVLAGAGSGKTRVLVHRIAWLLSVEHVSPYSILSV
TFTNKAAAEMRHRVSALMGSMQDGMWTGTFHGLAHRLLRMHYLEANLPKDFQIIDNDDQL
RLLKKIIKSLNLDEKRWAPRQAMWYINHKKDQGHRPQHTKNHSNFIENTWRDIYQSYQEA
TDRAGLVDFSELLLRAYELWLNHTNILDHYQQRWSHILVDEFQDTNTVQYAWIRALAEKR
AKVMIVGDDDQSIYGWRGAQVGNIQSFLKDFEGAETVRLEQNYRSTPHILTAANTLIANN
EGRMGKNLWTAQKEGEPISLYHAFNELDEARFVAHQIKKWHEKGGQLKDCAILYRSNAQS
RVLEEAFLQGNIPHRIYGGHRFFERQEIKDALAYLRLISNRHDDASFERVINTPARGIGE
RTLSVLRQAARDREKTLWETIQILLHEKILAGRAASGLRRFIELIDSLAYETSEMPLHLQ
TDRVIKDSGLWLMYQEEKGERAQGRIENLEELVNATQQYDYRQYEDDTLSPLQAFLSDAV
LEAGEGQADASQDSVQMMTLHSAKGLEFFKIFIVGMEEGMFPSKMALNESGRLEEERRLA
YVGLTRAMKELTLSYAERRRLYGEEVRNIPSRFIDELPKDCIQQVRLGSIISQPFHSRFT
DKSKYKIHSHQNESNENEGHFSLDQRVRHPKFGEGTVKDLEGSGQHARVQVAFSGNQLKW
LVVAYARLEII
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggattattctaaattaatcaatactttaaatgaaaaacaacgtactgcggtgacctca
tctgctgatcatatattagtactggccggcgcaggaagtggaaaaaccagagtgttggtg
caccgaattgcctggttactttcagttgaacatgtttctccttattccattctttccgtc
acctttactaataaagccgctgccgaaatgcgtcatcgtgtgtcggctttgatgggatca
atgcaagatggcatgtggactggcacttttcatggattagcccatcgtcttttaagaatg
cattatctggaagcgaatttgccaaaagattttcaaattatcgataacgatgatcaatta
cgcttgctcaaaaaaattattaaatcattgaatttagatgaaaagcgttgggctccacgg
caagccatgtggtacatcaatcataaaaaagatcagggacatcgccctcaacatactaaa
aatcactctaatttcattgaaaatacctggcgagatatttaccaatcctatcaagaagcc
actgatagagctggattagtcgatttttcagagctgttattacgtgcctatgagttatgg
ctcaatcacaccaatatcctggatcactatcagcagagatggagtcatattttggttgat
gaatttcaggacaccaatactgtccaatatgcctggatccgtgcattggctgaaaaaagg
gcaaaagtgatgatcgtgggagatgatgatcaatctatttatggctggcgcggggcgcag
gtggggaatattcagagctttttaaaagattttgaaggtgctgaaacagtaagactcgaa
caaaattatcgttcaactcctcatattttaacggcagccaataccttgattgccaataat
gaagggcgaatgggcaaaaatttatggactgctcaaaaagaaggggagcccatttctctt
tatcatgcttttaatgaattagatgaagcccgttttgtggctcatcaaattaaaaagtgg
cacgagaaaggaggccaattaaaagattgtgccattttatatcgtagtaatgcacagtct
cgagtattagaagaagcgtttttacaaggaaatattcctcaccgtatttacgggggtcat
cgtttttttgaaaggcaagaaattaaagacgcgcttgcatatctgcgtttgatttctaat
cgccatgatgatgcctcatttgaaagagtgattaatacacccgctcgtggtattggtgag
cgcaccttatctgtattgcgtcaggctgcaagagatcgtgaaaaaacgctttgggaaacc
attcaaattttgttgcatgaaaaaatattggcgggccgagctgcttcaggtttgaggcgt
tttattgagttaattgattcattggcttatgaaacatcagaaatgccgttacatttacaa
acagacagagtcatcaaagattctgggctttggttaatgtatcaagaagaaaaaggcgaa
agagcgcaaggacgtattgaaaatttagaagagctggtcaatgcgacacaacagtatgat
tatcgtcagtatgaagatgacactttgtcaccattacaggcttttctttccgatgcggtt
ctggaagcaggtgaaggtcaggctgacgcttcccaagactcagtacaaatgatgacgctg
cattctgctaaaggtttggaattttttaaaatctttattgttggaatggaagaaggcatg
tttcctagtaaaatggccttgaatgaaagtggaaggttggaagaagagcgtcgtctggct
tatgttggcttaacgcgtgcaatgaaagaattgaccttatcttatgcggaaagacgtcga
ctttatggagaagaagtgagaaatattccctctcgtttcattgacgaattaccaaaagac
tgcatacaacaggtaagattagggtcaatcatttctcagccatttcattcccgttttaca
gacaaatcaaaatataaaatccacagccatcaaaatgagagtaatgaaaacgaggggcat
ttttctttagatcaacgtgtgagacatcctaagtttggggaaggcaccgtcaaagattta
gaaggcagtggtcaacatgctcgtgtccaggttgccttttctggtaaccaattaaaatgg
ttagtcgtcgcttacgcaagattagaaatcatatga
DBGET
integrated database retrieval system
