Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0708
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Entry
HDEF_0708 CDS
T00911
Name
(GenBank) putative outer membrane autotransporter, pertactin domain protein
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
ACQ67441
UniProt:
C4K4E8
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Position
696153..698435
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AA seq
760 aa
AA seq
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MRYQKIVKHTITLYVLTLMIQSGPGFAEPKIFEEDTILKDKAYYTQGIEITNQAKVINEG
ALKVSVFTVEYDAINVSDASTLTLKGGEDKPIQITVKDGIAGLYASDKNTKIHADKIHIT
GVDFDYGIMATEKAQITINNSIIIGEDSDFSGFYASKPGTNIVSNKIDITTTKENSYGVK
VIDGANVDINNGTITGKEKKFIGLLAQGKNTTLAINNININVNDEKSIAVKAENGAKVIF
KGSNTINGKGDNIYGVWASGHGTNFEMDEMTITMNAEKGSGVRSPAGVRVSRGATGIIHE
GSAITGTGNNFDGLWAKGAHSNLTANQLTINIHGDDSGGVTVQSGALISIDKNSSVTTTG
ALSHALRLLPNSTLKINDSHIETIKTDSAIVYGKPPDTEEKRESVLQIKGGSLKAGGDLI
LSKGGTIAVVLNNVITSPPGSGYALNVVDNGEVNLEVKQTKLYGNILADNVSKASVSLSN
ESELNGWFKAINLSVDPTSTWSVTGHSILEQLKNEGNIVFTSQNNIFNTITTNDYRGNNG
TITFNTRLGGDDSPTDRLIINNNSKETTRVKVHNVGGKGAKTKEGIKIIEIKGKESEGRF
VQEGRIVAGAYDYQLQKGSQSGRDETSWYLVSRPEVPNNSLSTPAPPAPPVISGTLRPER
LSYAHNLHAANTMFQMTLHERLGEIQYTQPQASERPAPAMWIRAVGGHHTASMSDTHAQS
HRYIMMLGGDIAQWSSDGLNRYHVGFMGGYGRDQNTRPSR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgatatcaaaaaatagtaaaacacaccatcacgctttatgtgcttacccttatgata
caaagtggccccggttttgcagaaccaaagatttttgaagaagatacaatactgaaagat
aaggcgtattacactcaggggatagaaataacgaaccaagctaaagtgataaatgaaggg
gctctaaaagtatcagtattcactgttgaatacgatgcaattaacgtgtctgatgcctcc
actttaactttgaaagggggcgaggataaaccgattcaaatcacagttaaagatgggatt
gctgggttgtatgcctctgataaaaatacaaaaattcatgcagataaaattcatatcaca
ggagtagattttgattacggtatcatggcgacagaaaaagcacagataaccattaacaat
agcatcattatcggcgaagattctgatttttctggtttttacgcctcaaaaccaggcacc
aatattgtttcaaataaaatcgatattacaacaacaaaagaaaattcttacggtgtcaaa
gtgatcgacggtgcaaatgtagatatcaataatggcaccattaccggcaaagagaaaaaa
tttatcggccttttggctcagggaaaaaatacaacgctggccatcaataatataaatatc
aacgtgaatgatgaaaaaagtattgctgtcaaagcagaaaatggggcaaaagtaattttc
aagggtagcaacactattaacggtaagggagacaatatttacggtgtttgggccagcgga
catggaacaaattttgagatggatgagatgacaataacgatgaatgctgaaaaaggcagt
ggtgtcagatctcccgccggtgtcagggtctctagaggcgcaacgggcattatacacgaa
ggtagcgcgattaccggcacagggaataattttgacggcctttgggcaaagggagctcat
tcaaatttaacggccaatcaactgacaataaacatccatggtgacgacagcggaggtgtc
acagttcaaagcggggctttaataagtattgataaaaacagcagcgtgactaccacagga
gcattatctcatgcgctaaggctgctccctaacagtacattaaaaatcaatgattctcat
atcgaaacaatcaaaacagattcagcaattgtttatggaaaacccccagacactgaagaa
aaaagagagagtgtgcttcaaattaaagggggttccttaaaggccggcggtgatctcatt
ctgtcaaaaggcggaacaatcgcagttgttctaaacaatgtgattacctcccctcccgga
agtggatacgcccttaatgtcgttgataatggagaggtcaatttggaggtgaaacaaaca
aaactgtacggcaatattttagcggacaatgtcagtaaagccagtgtgagtttatcaaac
gagagtgagttaaatgggtggttcaaggcgatcaatttgtccgtcgaccctaccagcaca
tggtcggtcacaggtcattccattttggaacagttaaaaaatgaaggaaatattgtattt
acatctcagaacaacatttttaatacaataacaacaaacgattatcgcggtaataatgga
acaataacctttaatacgcgcttaggaggtgatgattcccccacagatagattgattata
aacaacaactcaaaagaaaccacccgtgtcaaagtgcacaatgtgggggggaaaggggct
aaaacaaaagaagggattaaaattattgagataaaaggaaaagaatctgagggaagattt
gttcaggaggggcgtattgttgcaggggcttatgattaccaactgcaaaaagggagtcaa
tcgggaagagatgaaaccagctggtatcttgtctccagacctgaggtccccaataattct
ctctccactcctgctcctcctgctcctcctgttatctcaggtacactccgacctgagcgt
ttgagctatgcccacaatcttcacgcggccaatacgatgtttcaaatgacattacatgaa
cgtctgggagaaattcagtatacacagcctcaggcaagcgaaaggccggcccccgccatg
tggataagggccgtgggaggtcatcataccgcctccatgtcagacacccacgctcaatct
caccgctatatcatgatgctcggcggagacatcgcccagtggtcttcagacggcctgaac
cgttaccatgtggggtttatgggcggatatggacgagaccagaacacccgcccatcacga
tga
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