Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0841
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Entry
HDEF_0841 CDS
T00911
Symbol
rfaF
Name
(GenBank) ADP-heptose; LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00540
Lipopolysaccharide biosynthesis
hde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HDEF_0841 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
HDEF_0841 (rfaF)
Enzymes [BR:
hde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
HDEF_0841 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
Core region
HDEF_0841 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
ACQ67562
UniProt:
C4K4R9
LinkDB
All DBs
Position
832670..833743
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AA seq
357 aa
AA seq
DB search
MKILVIAPSWVGDMMMSHSLYRTLKVRHPNATIDVMAPEWCRALLSRMPEVAQIWTMPIG
HGQLALFERRRLGIQLRSERYQRAYILPNSFKSALIPFFARIPHRIGWRGEMRYGLLNDW
RILNPAAFPMMVQRYVALADDVADMKTQALSAAHLPQPFLWPQLQVTEKAVAEVKAVFSL
KNDTPLIGFCPGAEFGPAKRWPHYHYAALAQTLIEKGYQIVLLGSAQDKHTGHKIRSALN
PKAQQHCHDFTGHTSLEQAIDLIAACGAIVTNDSGLMHIAAALNQPLVALYGPSNPDFTP
PLSPKAQVIRLISGYHKIRKGDDSEGYHDSLIGITPEQVMAALQTLCDASYPDEAQE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattggtgatcgcgccttcatgggtgggggatatgatgatgtctcacagtttg
tatcgcacgctgaaagtgcgtcaccccaatgcaacaatagatgtgatggcgccggagtgg
tgccgtgccttactgtcaaggatgccagaggtggcgcagatatggacgatgcccatcggt
cacggtcagttggcgctttttgagcggcgacgtcttggtattcaattgcgttctgagcgt
tatcaacgcgcgtatatattgcctaattcatttaaatcggcgttgatccctttttttgca
cgtattccgcaccggattgggtggcgtggtgaaatgcgatacggcctgttaaacgattgg
cgaatattaaaccccgccgcattcccgatgatggtgcaacgttatgtggcactcgctgat
gatgttgctgatatgaaaacccaggcgttatcggcggcccatttacctcaaccttttctg
tggcctcagttgcaggtcacagaaaaagcagtggcagaggtcaaagcggttttttcttta
aaaaatgacacaccgctgatagggttttgcccaggggccgaatttggcccggcaaaacgt
tggccccattatcattatgcggctttagcgcaaacactcattgagaaggggtatcagatc
gttttattgggatcggcacaagataaacacacagggcacaagatcagatcggccctcaac
ccaaaagcgcaacaacactgtcatgatttcaccggccacacttcgcttgaacaggcaatc
gacctgattgcggcttgtggcgcgatagtgacgaatgactcgggtttaatgcatatcgcg
gcggctttaaatcagccattggtcgcgttgtatgggccgagtaaccctgattttacgccc
cctttatccccaaaagcccaggtcatccgtttgatcagcggctatcataaaattcgaaaa
ggcgacgattcggaggggtatcatgacagtttgattgggatcacacccgagcaggtaatg
gccgctttgcaaacattgtgtgatgcttcttaccctgatgaagcacaggaataa
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