Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1262
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Entry
HDEF_1262 CDS
T00911
Symbol
sspB
Name
(GenBank) stringent starvation protein B, specificity factor for ClpXP protease
KO
K03600
stringent starvation protein B
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hde03021
]
HDEF_1262 (sspB)
Transcription machinery [BR:
hde03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HDEF_1262 (sspB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SspB
GRAM
Motif
Other DBs
NCBI-ProteinID:
ACQ67916
UniProt:
C4K5S3
LinkDB
All DBs
Position
1165590..1166081
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AA seq
163 aa
AA seq
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MTEILTMIPRRPYLLRAFYDWLIDNHLTPYLMVDATSEDVIVPRECVQDGQIILNIAPSV
VSDLSLTNKEVCFDAYFSSVPFSIVIPISSVLAIYAQENGFGTLFEAEIFESEEVKISHH
FLNLVDTSIDTEKNTEEASGVKKKIPSHRKKSKSQPPTLRIIK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaattttaactatgatcccacgacgtccttatctattacgcgcattttatgat
tggttaatcgataatcacttgaccccttatctgatggtagatgccacttctgaagatgtc
atagtaccgagagagtgtgttcaagatggccaaattattttgaatattgcaccctctgtt
gtttccgatttgtcattaactaacaaagaagtttgttttgatgcttattttagtagtgtg
cctttttctatagtgatccctatcagctcagtactagccatctatgcccaagaaaatgga
tttggcactttatttgaagcagaaatatttgaatcagaagaagtgaagatatcgcatcat
ttcttaaatctggtcgacacttctatagacacagaaaaaaatacagaagaggcatcagga
gttaagaaaaaaataccttcccatagaaaaaaatcaaaaagtcagcctcctactttgaga
attattaaatag
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