Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1301
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Entry
HDEF_1301 CDS
T00911
Symbol
radA
Name
(GenBank) DNA repair/recombination protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_1301 (radA)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HDEF_1301 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
RecA
AAA_22
AAA_14
GvpD_P-loop
SLFN-g3_helicase
AAA_16
ABC_tran
cobW
AAA
NTPase_1
AAA_24
Rad51
Zeta_toxin
Viral_helicase1
nSTAND3
T2SSE
DUF7125
AAA_29
AAA_28
Herpes_Helicase
DZR
Motif
Other DBs
NCBI-ProteinID:
ACQ67952
UniProt:
C4K5V9
LinkDB
All DBs
Position
complement(1211828..1213210)
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AA seq
460 aa
AA seq
DB search
MAKGIKRAFVCHECGGDYPRWQGQCSECHAWNTITETRLSNPAAHDRFIGGYAGEMRQNR
IQKLSEISLQKLPRFSTGFLEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTLSQLAEE
MKTLYITGEESLQQVAMRSHRLGLPMNHLDILSETGIEQICLLAQQQKPKLMVIDSIQVM
HMSDIQSSPGSVAQVRESAAYLTRFAKTQGVCVIMVGHVTKDGSLAGPKVLEHCIDCSIM
LDGDTDTRFRILRNHKNRFGAVNELGFFAMTEQGLREVSNPSALFLSRTDEITSGSSVVV
VREGTRPLLVEIQALVDRSMMPNPRRVTVGLEHNRLSMLLAVLHRHGGLQMSDQDVFVNV
VGGVKITETSADLALLLSLVSSLRNHPLPQDLVIFGEVGLAGEIRPVPNGQERIAEAAKH
GFKRAIVPHNNLPKKSIPNIEVSGVKKLSDALTVFTLDEP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagggataaaacgggcgtttgtatgtcatgaatgcgggggagattaccctcgt
tggcaaggacaatgcagtgaatgccatgcctggaatacgatcacagagacccgtctatca
aaccctgctgctcatgaccgctttattggcggctatgcgggtgagatgcgccaaaaccga
attcaaaaattatctgaaatcagcttacaaaaattacctcgcttttcgaccggttttctc
gaatttgatcgagtattaggcggcggcgtggttccagggagcgccattctaatcggagga
agccccggggcaggtaaaagcactttgttattgcaaacgttatctcaactggcggaagag
atgaagacgctttacatcacgggcgaagaatcactgcagcaggttgccatgagatctcat
cgtcttggtctgcccatgaaccatcttgatattctttcggaaaccgggattgaacaaatc
tgtttattggctcagcaacaaaaaccaaagctcatggtgattgattcgattcaggtgatg
catatgtcagacattcaatcctcaccaggcagcgtggcacaagtccgtgaaagtgccgct
tatttaacccgttttgcgaaaacacaaggggtctgcgtgatcatggtagggcatgtcact
aaagacggttctctggcaggccctaaagtgttagagcattgtattgattgctcgattatg
ctggatggggataccgacactcgttttcgaattttgcgtaatcataaaaatcgttttggg
gcagtcaacgagctggggttttttgccatgacggagcaaggtttacgtgaagtcagcaac
ccatcggcgctttttttgagccgtaccgatgaaatcacctctggcagttcagtcgttgtg
gtcagagaaggcactcgccctttactggtagaaattcaagctttggtagatcgctctatg
atgccgaatccaagaagggttactgtagggttagagcataataggctgtctatgttattg
gctgtattgcatcgtcatggggggttacaaatgtcggatcaagacgtttttgtgaacgtg
gtggggggtgtaaaaatcacggaaaccagcgctgatttggcactattgctctctttggtg
tcaagcttgagaaatcatccattacctcaggatctggtgatttttggagaagtcggtttg
gcgggtgaaatccgccctgtgcccaatggccaggagcgcattgctgaggcggccaaacac
gggttcaagcgagcgattgtccctcataataatctgcctaaaaaatcaataccgaacata
gaagtctcgggtgtcaaaaaactctcagatgccttaacggtatttactctggatgaaccg
taa
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