Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1511
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Entry
HDEF_1511 CDS
T00911
Symbol
sipB
Name
(GenBank) type III translocation machinery component
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
DUF5418
CdaS_N
DUF4153
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
ACQ68135
UniProt:
C4K6E2
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Position
1383750..1385168
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AA seq
472 aa
AA seq
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MKEAAQHKANELELFDPKTFLAQANQALLELQLVESAEKTDLEKNPEFTDIPIMRAPVSG
AESSYGGLYELLGEVANILGDADIVKLKENLKLLKENSKAVENNSKEIQGLVTSREELKE
ELQKLSKITDKEEKEKKLQQISLKIKDLNEKTNTLLKNYDLTHDQMKRMQDNVLSLTQLM
AEVINLMSESASIDIQNTKKVMEAEFQNNITQMKEQIKKNKEAMEKAKTMKEKMGCIAKV
IGHVVTAITVLSSIAAVFTGGASLVIAALALGLLAADKSLELSGKKSLTARAMEPLMKAI
ADGIASRLEKDGLDKNTANLIAAILTAIILVVALVLVSAGLALKSVSQLISKIVPKFISK
FIGKMSSKTTQLMLKYGNYVMQALRAILHPTGHAINGTGEIISNEYKGKSVDAQAEIKRL
QFERKRINELRQSIESPMESISDAVVHLKEDLSQAILRALSSMQVFVRAIKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagccgcacaacataaagcgaatgagttagagctttttgatcctaaaacgttt
ttagctcaagcaaatcaggcattattagaattacagctcgtcgaatctgctgaaaaaacc
gatcttgaaaaaaatcctgagttcacagatatcccgattatgagagcgcctgttagcgga
gcggaatcttcctatgggggattgtacgagctgcttggagaggtcgctaatattttgggg
gatgcggatattgttaagttaaaagagaatttaaagttattgaaagaaaacagcaaagcc
gtagaaaacaactcaaaagaaattcaaggtttagtcactagcagagaagaactcaaggaa
gaactgcaaaaattatcaaaaatcacagataaagaagagaaggagaaaaaattacaacaa
atcagtctaaaaattaaagacctaaatgaaaaaacaaatactttacttaaaaattatgat
ctgactcacgatcaaatgaaacgcatgcaagacaatgttttatctttaacgcaattaatg
gctgaagtaataaatctgatgagtgagagcgctagcattgacatacaaaatactaaaaaa
gtgatggaagctgaattccaaaacaatattacacaaatgaaggagcaaataaaaaaaaat
aaagaggcaatggagaaagcaaaaaccatgaaagaaaaaatggggtgtattgctaaggtg
attggacatgtagtcactgcgattactgttctcagcagtatcgctgccgtttttacaggg
ggagccagtttagtcatagcggcacttgctctaggtttattagctgcagacaaaagcctg
gaactttctggaaaaaaatcattaaccgccagggccatggagcccctcatgaaagccata
gctgatggtattgcatctagacttgaaaaagatggtcttgataaaaacacggctaattta
atagccgccatcttgactgcaattattttggttgtagcgcttgtgttagtttcagcaggc
ttggctttgaaatcggtttctcaattaatttctaaaatcgtccctaaatttatttcaaaa
tttattggaaaaatgtcctcaaaaacaacccagttaatgcttaagtacggtaattatgtc
atgcaggctctgcgtgcaattttacatccaaccggtcatgcaataaacggcacgggagag
attatctcgaacgagtataagggaaagtccgtggatgctcaggctgagatcaaaaggtta
caatttgagagaaagcgtattaatgagctaagacaaagtattgaatcgcctatggaaagc
atttctgacgcagtagttcatttaaaagaagatctcagtcaagcgatcttgagagcactt
tcgagtatgcaagtttttgtaagagccataaaaggctaa
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