Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1598
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Entry
HDEF_1598 CDS
T00911
Symbol
birA
Name
(GenBank) bifunctional: biotin-[acetylCoA carboxylase] holoenzyme synthetase; transcriptional repressor of biotin synthesis (BirA family)
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00780
Biotin metabolism
hde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
HDEF_1598 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hde03000
]
HDEF_1598 (birA)
Enzymes [BR:
hde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
HDEF_1598 (birA)
Transcription factors [BR:
hde03000
]
Prokaryotic type
Helix-turn-helix
Other families
HDEF_1598 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
BPL_LplA_LipB_2
Mga
Motif
Other DBs
NCBI-ProteinID:
ACQ68210
UniProt:
C4K6L7
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All DBs
Position
complement(1446374..1447330)
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AA seq
318 aa
AA seq
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MKNFIVPFRLIRLLSTGAAYSGEQLGQYLEISLSAVNQHIQTLRHWGLEIEAQTIKGYYL
SSPIELLDEKKILRDLPEGRIKVLALVDSTNQYLLDNIETLRSGDACVAEHQTAGRGRRG
REWVSPFGQNLYLSMFWRLEKGTAAAVGLSLVIGIVITQVLRNLGGIDIRVKWPNDLYYR
DKKLAGVLVELLGKKFKPAQVIIGMGININNPSSNKGIEQNWSHLKEAGITIDRNKLTAL
LLSELRSQLIEFEKTGLSTFISKWHELDNYLNRPVKLIVGDQQIQGIARGIDQHGGLLLE
TEGGIKTYQVGDISLRGR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaattttatcgtgccttttcgcttaatccgattgttatcaacgggggctgcctat
tcaggcgaacaattagggcaatatcttgaaataagcctttcagccgtcaatcaacatatt
caaacgctccgacattgggggctggaaatcgaggctcaaacgattaagggatattattta
tcgtctcctattgaattactggatgaaaaaaaaatattgagagatttacctgaaggccgg
ataaaagtattggctttagtcgattcaacgaatcagtatttattagataatatagagaca
ctccgttctggtgatgcctgtgtcgcggagcaccaaacagcagggcgaggaaggcggggc
cgagaatgggtttcaccctttggtcaaaatctttatctttcgatgttttggagactcgaa
aaagggacggcagcggctgtcggattaagtttggtcatagggattgtgataacgcaagtg
ttgcgcaatttggggggaatagacatccgagtgaagtggccaaacgatctgtattatcgg
gataaaaaattggcaggggttttggtggagcttctgggaaaaaaatttaaacccgctcaa
gtgattattggtatgggtattaatatcaacaacccatcatcaaacaaagggattgagcaa
aattggagccatctcaaagaagcaggaataacaatagatcgtaataaattaaccgcttta
ttattatcggaattacgttctcaactcattgaatttgaaaagacaggtttatctactttt
atttcgaagtggcacgagttggataattatcttaatcgacccgtcaaattaatcgtcggg
gatcaacaaatacaaggcattgccagaggtattgatcaacacggggggttattattagaa
acagaaggaggcatcaaaacttatcaagttggagacatttctcttcgtggaagatga
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