Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1724
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Entry
HDEF_1724 CDS
T00911
Name
(GenBank) transcriptional accessory protein, RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HDEF_1724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
Spt6_S1
RecG_N
Motif
Other DBs
NCBI-ProteinID:
ACQ68327
UniProt:
C4K6Y4
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Position
1564045..1566351
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AA seq
768 aa
AA seq
DB search
MMNSLNHLLAEEIKADPKQVSCAVQLLDEGNTVPFIARYRKEITGGLDDTQLRLLESRLG
YLRELADRRHSILKSIEEQGKLTDALANAINSTLNKAELEDLYLPYKPKRRTKGQIAIEA
GLESLAETLWQDPHQDPEILAQQYINAEKNITDTKSALEGARYILMERFSEDAALLSKVR
QYLWKNAHFVSQVLPEKEEVGAKFRDYFDYQEPIAKIPSHRALALFRGRSEGVLQLALKV
LSDEDPSEAILVEHFNIRLNNAPSDHWRKTVLQWAWRVKIIPHLETELMGNVREMAQEQA
IEVFALNMKDLLMAAPAGMRPTMGMDPGLRTGVKIAVVDATGKLLATDTVYPHTGQAAKA
AIRVAHLCLEHQVEWVAIGNGTASRETERFYAEVQKQYPEVNSQKVIVSEAGASVYSASE
LAAEEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAKKLTAVV
EDCVNSVGVDLNTASVPLLTRVAGLSTSMAKNIVNWRDLNGRFIHRQQLLNINQVGPKAF
EQSAGFLRINNGDNPLDASTVHPEAYPVVENILKSTKQHLSQLMGNISILRSLNPENFVN
DRFGLPTVRDILKELEKPGRDPRPEFKTPIFSDEIETLKDLIPGMILQGSVTNITHFGAF
IDIGVHQDGLVHISSMANQFVTDPHQLIKTGDIVQVKVLSIDMERKRIALSMRLDEQIAD
KKDKTASENESKEKRLTKKRPLKNAPISHFKNSALSDAFASAIKNKRS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcattaaaccatcttcttgcagaagaaattaaagccgatcccaagcaggtt
tcttgtgcagtgcagctattagatgaaggaaataccgttccttttatcgcgcgttatcgt
aaagaaatcacagggggattagatgacactcaacttcggttattagaaagccggttgggt
tatttgcgtgaattagcggatcgtcggcacagcattttgaagtcgatagaggaacaggga
aagctcaccgatgctctagccaatgcgattaacagcaccctaaacaaagcagaattggaa
gacctttatttgccttacaaaccgaagcgtcgtaccaaagggcagattgcgatcgaagca
ggtcttgagtctcttgccgaaacgttatggcaggacccgcatcaagatcctgagatcttg
gcgcaacaatatatcaatgctgaaaaaaacatcacagacacaaaatccgctttagaaggc
gcccgttatattttaatggagcgtttttcggaagacgcggcattgctctcaaaagtgcgt
caatatctttggaaaaatgcgcatttcgtttctcaggttttacctgagaaagaagaagta
ggcgctaagtttcgtgattattttgattatcaagagcctattgcaaaaattccctcacat
cgtgcgctcgcgctatttcgcgggcgtagtgaaggtgtgcttcaattggctttaaaggtg
ctttcagacgaagatcccagcgaagcgattctggtggagcattttaacattcggcttaat
aatgcgccttcggatcattggcgcaaaaccgtgttgcaatgggcgtggcgtgtgaaaata
atcccccatcttgaaacagagttgatggggaatgtacgagaaatggcccaagaacaagcc
attgaagtctttgcactcaatatgaaagatttgctgatggcggcccctgcagggatgcgt
cccacgatgggaatggatcctgggttaagaaccggggtgaaaattgcggtagtcgatgcc
acaggaaaattgctcgcgaccgatacggtgtatccccacacaggtcaagcagccaaagcg
gctatccgagtggcgcatttgtgtcttgaacatcaggtagaatgggttgcgattgggaac
ggaacggcatcccgagaaacagaacgcttttatgcagaagttcaaaagcagtatccggaa
gtaaacagtcaaaaagtgattgtcagtgaagcaggggcttccgtttattccgcttctgaa
ctggcggcagaagagtttcctgatttagatgtgtctattcgtggtgctgtctctattgct
cgacggctacaggatcctctggctgaattagtgaaaatcgatccaaaatcgattggggtg
ggccaatatcagcatgatgtcagccaaacgcagttggctaaaaaattaacggccgtggtg
gaagattgtgtcaattcagtgggcgtcgatctcaataccgcctccgttccattactgact
cgagtggctggcttaagcacaagcatggcaaaaaatatcgtgaattggcgtgatcttaac
ggccgttttattcatcggcagcaattactcaacattaaccaagtcggcccaaaagcgttt
gaacaaagcgcgggatttttgcgcatcaataatggagacaatcctttagatgcttccact
gttcatcctgaagcctatccagtagtggaaaatattttgaaatcgacgaaacaacactta
tctcaattgatgggcaacatctccattttaagatcattaaatccagagaattttgtgaat
gaccgatttggtctccccacagtgcgcgatattttgaaagagcttgaaaaaccagggcgg
gatccgagacctgagtttaaaacgccgatcttttctgatgagatagaaacgctcaaggat
ctgattccaggcatgattttacagggctctgttactaacatcactcattttggcgctttt
attgatataggtgtacatcaagacggcctggtgcatatctcttccatggctaatcaattt
gtgacagatcctcatcagctgatcaaaacgggcgacattgtacaggttaaggtgctttct
attgatatggaacgcaagcgtattgctttgagcatgcgattggacgaacagatcgctgat
aaaaaagacaaaacggcttctgaaaatgaatcaaaagaaaagagactgaccaaaaaaaga
cctcttaaaaatgcccccatcagtcattttaagaattctgcactcagcgatgcgtttgct
tctgcgataaaaaataaacgttcatag
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