Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1886
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Entry
HDEF_1886 CDS
T00911
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, Fe-S protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00020
Citrate cycle (TCA cycle)
hde00190
Oxidative phosphorylation
hde00720
Other carbon fixation pathways
hde01100
Metabolic pathways
hde01110
Biosynthesis of secondary metabolites
hde01120
Microbial metabolism in diverse environments
hde01200
Carbon metabolism
Module
hde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hde_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDEF_1886 (sdhB)
00650 Butanoate metabolism
HDEF_1886 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HDEF_1886 (sdhB)
00720 Other carbon fixation pathways
HDEF_1886 (sdhB)
Enzymes [BR:
hde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HDEF_1886 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4
Fer4_16
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
ACQ68477
UniProt:
C4K7D4
LinkDB
All DBs
Position
1721264..1721980
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AA seq
238 aa
AA seq
DB search
MTLEFSIYRYNPDVDDKPRMQDYSLPFEEGRDMMLLDALIALKEKDPTLTFRRSCREGVC
GSDGMNMNGKNGLACITPLSSLIKANQKMVIRPLPGLPVVRDLVVDMAQFYAQYEKIKPY
LLNDGKNPPAREHLQSPEERAKLDGLYECILCACCSTACPSFWWNPDKFVGPAGLLAAYR
FLIDSRDTQTQTRLEGLDDAFSVFRCHGIMNCVSVCPKGLNPTRAIGHIKSMLLERGA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgaattttcaatctatcgttataatcctgatgtcgatgataagccacgaatg
caagattatagtctgccattcgaagaaggcagggatatgatgttgctcgatgccctcatt
gcgttaaaagaaaaagatcccaccctgacttttcgccgatcctgtcgtgaaggtgtttgt
ggttcagatggcatgaacatgaatggcaaaaatgggctggcttgtattacaccgttgtca
agcctgattaaagccaatcaaaaaatggtcattcgccctctccctggtctgcctgtggtg
cgtgatctcgtggtggatatggcccaattttatgcccagtacgaaaaaatcaagccttac
ctattaaatgacgggaaaaacccgcctgcccgagaacatttacaatctcctgaagaaaga
gccaaattagacgggttatatgaatgtattttatgtgcttgttgttccactgcttgccct
tcattttggtggaaccccgataaatttgtgggccccgcagggttattagccgcatatcgt
tttttaatcgacagcagggatacacaaacgcaaactcgtttagagggtttagatgatgca
ttcagtgtttttcgttgtcatggcattatgaattgtgtcagtgtttgccctaaaggcctc
aacccaacacgcgccatcgggcacatcaaatccatgttattagaacgtggtgcttaa
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