Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1957
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Entry
HDEF_1957 CDS
T00911
Name
(GenBank) putative inner membrane protein
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_3_2
DUF4625
Big_3_3
Y_Y_Y
Cadherin_5
Glucodextran_B
PKD_4
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ACQ68544
UniProt:
C4K7K1
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Position
complement(1787585..1790179)
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AA seq
864 aa
AA seq
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MATQKIFAQHNSRIDLSSLGNKNQVQVAISGPDLKLTSPQGSVTIVNGAIYSSLKDSQLS
FQFQDGALKGKDLLSQVNLENIDFKSADSFLVDQVQNKALQEEQEALKQKMRQAEKDKEE
AEKAREKAEKEKAEEKKAREKAEKEKAEAEKAALEAQEAQKSSQQIEEALNEFLTQANTK
AALAQITPDERDISLDSASSLHKESSATVEVAQVNKNANRSSGLNNPAPNPKIDLKISLA
LDDKSNSSGQKDNLTNVNAPKLVGTTMPGTEVTIQKGSTTLGSTKSDGQGNFTFTPTDLT
DGPHEFMALGEYKGNKAQAKLSLVIKSSTQPPTFEMNSEDIALTQEERSDIFLIKNVTPT
IHGKAEANTQVSIYNKKITDDKETRLDTVQVNSVGEWSYTFKDPQLAQGDNTISVVAEDK
AKNIAAAKKTINLDSIPPTIEKIEITQDFLISDRVANTKTPTFKITTEPDAKIQLYLPGN
TQPLYIRQSEEEVADGKQAYYLTIPESTFTDDGDYKIEVVATDKRGNSTERQEFNFEVDT
VEVGAVEITLEDKTGDKASNFTDKESPKLLFKPTGKNITKIEIELKSSSDGSIQKGTLEK
ESLSRSWTPKQKLKIEGEYTVTAKAYKGDNPGSPSSETIHFYNTQPTIQTIELGRSDQGR
DPKYTKNSKPTLLVKIDPKDASRAWKVEYEIKNSKGSVENSEVTQLSNATYTVTPQTDWS
HGEYTVIAKLLDKAGNSSTKNEVFYFNDTKPDPSITFAEGTDLYQIDNKKIIDNDSKKFV
IKNAKGNIELHEKDLITVKLTKKMGAKTTSESFNNTDSNKDFSYHNQQKEWKFFPEEKKW
EEADYQLQVTVTNQYGSVGTSNEF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcaaaaaatatttgcacaacataattccaggattgatttgtcttcactaggg
aataaaaatcaggttcaagtggcgatatcagggcccgatctgaaattaacctcaccgcaa
ggcagtgtgaccattgtgaatggggcgatttattccagcttaaaagacagccaactgtct
tttcagtttcaggatggtgctttaaaggggaaagacttactcagtcaggtcaaccttgag
aatatcgactttaaaagcgccgattcttttttagtcgatcaggttcaaaataaagcgctt
caagaagaacaggaagcgctgaaacaaaaaatgagacaggccgaaaaagacaaagaagag
gcagaaaaagcaagagaaaaagccgagaaagagaaagcagaagaaaaaaaagcaagagaa
aaagctgagaaagagaaagcagaagccgagaaagccgcgttagaagcgcaggaagcacaa
aaatcctctcaacaaattgaagaagcgctcaatgaatttttaacgcaagcgaacaccaaa
gcggccttggcacaaatcaccccagatgaaagagacatctctctggattctgcctcttct
ttacataaagaatcgagtgcaacggtagaagttgcccaggtcaacaaaaacgcaaaccga
agcagtggtttaaacaacccggccccgaaccctaaaatcgatttaaaaatcagtttggcg
cttgacgacaagagtaatagcagcgggcaaaaagataatttaaccaacgtgaatgcacct
aaattagtgggcaccaccatgccgggcactgaggtgacgattcaaaaaggcagcacaaca
ttagggagcaccaaatcggatggtcaaggtaattttacctttactcccactgatttaaca
gatggcccccatgaatttatggcactgggagaatataaagggaataaagcccaggcaaaa
ttatctctcgtgattaaatcgagcactcaaccccctacttttgagatgaattcagaagac
attgcactcacgcaagaggagcgctctgacatttttttgattaaaaatgtgacgccgacc
attcacgggaaggcggaagccaacacgcaagtcagcatctacaataaaaaaataaccgat
gataaagaaacacgactagacacagttcaagtcaattcagtcggagaatggagctatacc
tttaaagaccctcaacttgcgcaaggggataacactattagcgtcgttgcagaagataag
gccaaaaacatcgctgctgccaaaaaaaccattaatctggattctattcctccaacaata
gagaaaattgaaattacacaggattttcttattagtgaccgtgttgccaatacgaaaaca
ccgacattcaaaatcaccacagagcctgacgccaagattcaactttatttaccaggcaac
acacagccgttatatataagacagtcagaagaagaagtggcagatggcaagcaagcctat
tatttgacaatacctgaatccacctttacggatgatggagactataaaatcgaggtagtt
gccaccgataaaaggggcaatagtacagaaagacaagaatttaactttgaggtggatacg
gttgaggtgggggccgtagaaattaccttagaggataaaacaggggataaagcatcaaac
tttactgacaaggaatcacccaaattgcttttcaagccgaccggaaaaaacatcacgaaa
atagagattgagctcaaaagcagtagtgatgggagcattcaaaaaggcacactggaaaaa
gaatccttatctagaagttggaccccgaaacaaaaattaaaaatagagggggaatatacg
gttaccgcaaaggcttataaaggggacaacccagggagtccaagcagtgaaacaatccat
ttttacaacactcaacctactatccaaacgattgaactcggtaggagtgaccaaggtcgt
gaccctaagtatacgaaaaactccaaaccgacattgttggtgaaaattgatccaaaagat
gcatccagggcatggaaagtagagtacgagataaaaaatagcaagggctccgttgaaaac
agcgaggtcacacagctgagtaatgcgacctatacagtgacgcctcagactgattggagt
catggtgaatacacagtcatcgcgaaactgttggataaagcgggcaattcttcgacgaaa
aacgaggtattttattttaatgataccaaacctgacccctctatcacatttgccgagggt
actgatttatatcaaatagacaataaaaaaatcatagacaacgacagtaaaaaattcgtg
ataaaaaatgcaaaaggaaacatagaattacacgaaaaagatttgattacagtcaaattg
acaaaaaaaatgggagcaaaaactacctctgaatcctttaataatacagactcaaacaag
gatttttcttatcacaatcaacaaaaagaatggaaattttttcctgaagaaaaaaaatgg
gaggaagccgattatcaactccaagtaaccgtaaccaatcaatatggaagcgtagggacc
tctaatgaattttga
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