Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2009
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Entry
HDEF_2009 CDS
T00911
Symbol
yidC
Name
(GenBank) protein involved in protein translocation and folding, substrates includes ATP synthase, SecYEG, LacY
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde02024
Quorum sensing
hde03060
Protein export
hde03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HDEF_2009 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HDEF_2009 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDEF_2009 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hde03029
]
HDEF_2009 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hde02044
]
HDEF_2009 (yidC)
Mitochondrial biogenesis [BR:
hde03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
HDEF_2009 (yidC)
Secretion system [BR:
hde02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HDEF_2009 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
DUF4755
Motif
Other DBs
NCBI-ProteinID:
ACQ68588
UniProt:
C4K7P5
LinkDB
All DBs
Position
complement(1832189..1833832)
Genome browser
AA seq
547 aa
AA seq
DB search
MDSQRNLLLIAFFFVSFMIWQTWQVDHNPLKAVENGTALVTNNNGTETSTLVPLSNTQGQ
KITVTTDVLSLTIDTQGGDIQQANLLAYPDTLGSKKSFQLLESTPDFVYEAQSGLTGKNG
PDNPLNGHRPVYSVKQPHFVLPEGQNELQIPLTFTDKNGLVLTKTFILKRNDYAIRVLYR
INNASSTPLEFNFFGQLKQSTQLPKHRDTASSNFALHTYRGAAYSSKEDKYKKYSFSDIE
DANLNITTQGGWVAMLQQYFATAWIPNAGETHDFYSRHLGHGLVASGFKSLPVLVNPGEQ
KELSATLWVGPELQDKMAVIAPHLDLTVDYGWLWFISQPLFKLLKFIHGFVGNWGLSIIL
ITFIVRGIMYPLTKAQYTSMAKMRMLQPKLTEMRERIGDDRQRMSQEMMALYKSEKVNPL
GGCLPLIIQMPIFLALYYMLMGSVELRHAPFILWIHDLSAQDPYYILPILMGLTMYFIQK
MSPSTITDPMQKKIMNFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLESRGL
HNRDKKK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaacgtaatcttctacttatcgctttttttttcgtctcttttatgatctgg
caaacctggcaagtcgatcataatccgctgaaagcggttgaaaatggtactgcccttgtg
actaataataatggaacagagacttcaaccctggtgccgctctccaatactcaagggcaa
aaaatcactgtcacaacagatgtgttgtcattgaccatcgatacacaagggggagatatt
caacaagcaaaccttcttgcatatccagatactttaggctcaaagaaaagctttcagttg
ctcgaaagtacaccagattttgtttatgaagctcaaagtggactcactgggaaaaatggc
ccagataatcctctcaatggccatcgccctgtttattccgtaaaacagcctcattttgta
ttgcctgaaggtcaaaatgaattgcagatccctctgacttttacggataaaaacggcttg
gtattgaccaaaacttttatcctcaaacgtaatgattatgcgattcgtgtgctttatcgg
ataaacaatgcttccagtactcccttggagttcaatttttttggtcaattaaaacaaagt
actcagcttcctaaacatcgtgataccgctagcagtaattttgctttacatacgtatcga
ggcgccgcttactcttctaaagaagataaatataaaaagtacagctttagtgatattgaa
gatgcaaatttaaatatcacgactcaggggggatgggttgccatgctacagcaatacttt
gcgacagcctggatccctaacgccggtgaaactcatgatttttattctcgtcacctaggc
catggtttggtcgcctcgggttttaaaagccttcctgtcctggtcaatcctggcgagcaa
aaggaattatcagcgaccttatgggtgggccccgagctacaggataagatggcggtgatt
gcacctcatcttgacttgactgtagattatggctggctctggtttatctcacagccgttg
tttaaattattgaaatttatccatggttttgtcggtaattgggggctttctatcatcctg
attacctttattgtcagagggatcatgtatcccttaaccaaagcacaatatacttccatg
gccaagatgcggatgttacagcctaagctgacagagatgcgcgaacgcataggggatgac
agacaacgcatgagtcaagagatgatggcattgtataaatctgaaaaggtgaatccactc
ggtgggtgtttgcctttgatcattcaaatgccgatctttttggcgctgtattacatgttg
atgggttctgttgagctccgtcacgcgccctttatcctatggattcacgatttatctgct
caggatccctactatattttaccaatactgatggggctgaccatgtattttattcaaaaa
atgtccccaagtaccatcacagatcccatgcaaaaaaagatcatgaactttatgcccgtg
atcttcactgtgttctttttatggttcccttcaggattagtgctttactatatcgtgagt
aatctggttaccattatacagcagcaattaatttatcgtggtttggaaagtcgaggctta
cataaccgtgataaaaagaaataa
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