Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2042
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Entry
HDEF_2042 CDS
T00911
Symbol
lpd_2
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00010
Glycolysis / Gluconeogenesis
hde00020
Citrate cycle (TCA cycle)
hde00260
Glycine, serine and threonine metabolism
hde00280
Valine, leucine and isoleucine degradation
hde00310
Lysine degradation
hde00620
Pyruvate metabolism
hde00630
Glyoxylate and dicarboxylate metabolism
hde00640
Propanoate metabolism
hde00670
One carbon pool by folate
hde00785
Lipoic acid metabolism
hde01100
Metabolic pathways
hde01110
Biosynthesis of secondary metabolites
hde01120
Microbial metabolism in diverse environments
hde01200
Carbon metabolism
hde01210
2-Oxocarboxylic acid metabolism
hde01240
Biosynthesis of cofactors
Module
hde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hde_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HDEF_2042 (lpd_2)
00020 Citrate cycle (TCA cycle)
HDEF_2042 (lpd_2)
00620 Pyruvate metabolism
HDEF_2042 (lpd_2)
00630 Glyoxylate and dicarboxylate metabolism
HDEF_2042 (lpd_2)
00640 Propanoate metabolism
HDEF_2042 (lpd_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HDEF_2042 (lpd_2)
00280 Valine, leucine and isoleucine degradation
HDEF_2042 (lpd_2)
00310 Lysine degradation
HDEF_2042 (lpd_2)
00380 Tryptophan metabolism
HDEF_2042 (lpd_2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HDEF_2042 (lpd_2)
00670 One carbon pool by folate
HDEF_2042 (lpd_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hde04147
]
HDEF_2042 (lpd_2)
Enzymes [BR:
hde01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HDEF_2042 (lpd_2)
Exosome [BR:
hde04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HDEF_2042 (lpd_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
AlaDh_PNT_C
FAD_binding_2
DAO
Thi4
FAD_binding_3
Lycopene_cycl
3HCDH_N
UDPG_MGDP_dh_N
DUF7447
FMO-like
Motif
Other DBs
NCBI-ProteinID:
ACQ68614
UniProt:
C4K7S1
LinkDB
All DBs
Position
complement(1871451..1872884)
Genome browser
AA seq
477 aa
AA seq
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MKNTQVKTQVVVIGAGPAGYSAAFRCADLGLETLLVERYATLGGVCLNVGCIPSKALLHV
AKVISDTKTLEEHGVSFGAPKIDLKKMVGWKNNVIQKLTGGLSGMAKMRQVKVITGEAQF
SGSHTLLVKTQNAEQTEIRFDNAIIAAGSSAIELPFIPHEDPRIWNSTDALKLETIPKRL
LVMGGGIIGLEMATVYQALGSEIDVVEMSDQLIPAADKDVIKIFTKKIEKKFNIMLQTKV
TQVKAQEDGIFVTMEGNQDPEEHRYDAVLVAIGRKPNGKSLNAEKAGVTVDERGFICVDK
QLRTNIPHIFAVGDIVSQPMLAHKGVHEGHVAAEVISGLKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKQKGIEYEIAIFPWAASGRAIASDCSEGMTKLIFNKKTGRIMGGAIVGSNGG
ELLGEIGLAIEMGCDAEDMALTIHAHPTLYESVGLAAEIYEGSITDLPNSKAKKSKA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatactcaagtcaaaactcaagtcgtcgtgattggggcaggccctgcaggatat
tccgcggcatttcgctgtgcagatttagggttagaaacactattggttgaacgttacgcc
accttagggggagtgtgcttaaacgtgggttgcattccttctaaagcattactccatgtt
gctaaagtgatctcagacacaaaaacactagaagaacatggggtgagttttggcgcaccc
aaaattgatttaaagaaaatggtgggatggaaaaacaacgtaattcaaaagcttaccggt
ggattatcgggcatggcgaaaatgcgtcaggtcaaggtgataacaggcgaagctcaattt
agcggatctcacactctgttggtcaaaacccagaatgcagaacaaactgaaatccgcttt
gataatgcgattattgcggcgggttcgagcgcaatagaacttcctttcattccgcacgaa
gatcctcgcatttggaattcgactgatgcattgaaactagaaaccattccaaaacgttta
ttagtgatgggcggagggattatcggtttagaaatggcgaccgtttaccaagcactgggg
tcagagatcgacgtcgttgaaatgtcagatcaactgatccctgcggctgataaagacgtc
atcaaaattttcaccaaaaagatcgagaaaaaattcaatatcatgcttcaaaccaaggtc
actcaagtcaaagctcaagaggacggcatttttgtgacgatggaaggcaatcaagatcct
gaagagcaccgttatgatgcggttttggtggctattgggcggaaacccaatggaaaatcg
ctcaacgctgaaaaagcaggcgtgacggtggatgaacgtggttttatctgtgtggataaa
caattacgcaccaatattccccatatttttgcggtgggcgatattgtaagccaaccgatg
ttggcccataaaggcgtacacgaaggccatgtggccgcggaagtcatttcggggttaaaa
cactattttgatcccaaggtcattccttctattgcttatactgaacctgaagtcgcttgg
gtcggattaacagagaaagaagccaaacaaaaaggcattgagtatgaaatcgccattttc
ccctgggccgcttcaggtcgagccattgcttctgattgttcagaaggtatgactaagttg
atttttaataaaaagacgggtcgtattatgggcggtgcgattgtcggcagcaatggcgga
gaattactgggagaaatcgggctggccatcgaaatgggatgtgatgcggaagatatggcg
ttaaccatccatgctcacccaaccttatatgaatctgtgggattagcagctgaaatttat
gaaggcagcatcaccgatttgcctaattcgaaagcaaaaaaaagtaaagcataa
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