Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2063
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Entry
HDEF_2063 CDS
T00911
Symbol
hns
Name
(GenBank) transcriptional regulator, DNA-binding protein HLP-II (HU, BH2, HD, NS), increases DNA thermal stability
KO
K03746
DNA-binding protein H-NS
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hde03036
]
HDEF_2063 (hns)
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_2063 (hns)
Chromosome and associated proteins [BR:
hde03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HDEF_2063 (hns)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HDEF_2063 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
ATG17_like
DUF7179
DUF3037
DUF6626
RsbRD_N
FapA
Motif
Other DBs
NCBI-ProteinID:
ACQ68630
UniProt:
C4K7T7
LinkDB
All DBs
Position
complement(1889017..1889439)
Genome browser
AA seq
140 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECSLETLEEMLEKLMAVVNDRKQEENKAKKDKEEYKRKLEK
MKAILVEEGIDPNELLQISTSNKVTAKTKRAIRPAKYQYIDEKGEKKTWTGQGRTPALIK
KALEEKKKSLEDFLLKDGLS
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctttaaaaattctgaataatatacgtacgttgcgtgctcaagcccgtgaa
tgtagtcttgaaacattagaagaaatgcttgaaaaattgatggctgtagtgaatgaccga
aaacaagaagaaaataaggctaaaaaggataaagaagaatataaacgtaaattagaaaaa
atgaaggcaattttagttgaagagggtattgaccctaacgagttattgcaaataagtact
tctaataaagtaacagctaaaacaaaacgcgccattcgccctgcgaaatatcaatatatt
gacgaaaaaggtgaaaaaaagacctggacaggtcaaggtcgtactcctgcgttaattaaa
aaagcgcttgaagaaaagaaaaaatcattagaagacttcttattaaaagacggcttatca
taa
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