Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2084
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Entry
HDEF_2084 CDS
T00911
Symbol
pth
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hde03012
]
HDEF_2084 (pth)
Enzymes [BR:
hde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
HDEF_2084 (pth)
Translation factors [BR:
hde03012
]
Eukaryotic type
Release factors
HDEF_2084 (pth)
Prokaryotic type
HDEF_2084 (pth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
SPMAP1-like
Motif
Other DBs
NCBI-ProteinID:
ACQ68650
UniProt:
C4K7V7
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All DBs
Position
1906716..1907309
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AA seq
197 aa
AA seq
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MSNIKLIVGLANPTAEYSQTRHNAGAWYVKQLSERHNLSLKKSPKFFGYTGRLKIANQNV
LLMIPDVFMNLSGTAVFAITKFYQILPEELLVAHDELDFLPGQAKFKTGGGNAGHNGLKD
IQKKLGNNSEFHRLRIGIGHPGDTSKVVGFVLGKPPVSEKKLIDHAIDECLTFTEILFKE
NMIKAVHHLHSSSLNKK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattaaacttattgttggtttggcaaatccaacggctgaatattcccaaacc
cgccataatgcgggggcttggtatgtgaaacagctttcagaacgtcataacctatcatta
aaaaaatcaccaaaattttttggttacacagggcgattaaaaatcgcaaaccaaaacgta
cttttgatgatccccgatgttttcatgaatttgagtggtaccgcggtctttgccataaca
aaattttatcaaattttgccagaagagttattagtggcacacgatgagttagatttttta
ccagggcaagccaaatttaaaacaggcggcggaaatgcgggacacaacggcttaaaagat
attcagaaaaaactcggcaacaacagcgaatttcatcgtttacgaattggtattggtcat
cccggtgacaccagcaaggttgtaggctttgtgcttggtaagccccctgtcagtgaaaaa
aaattaattgatcatgcgattgatgagtgcctcactttcactgaaattttatttaaagaa
aatatgataaaagcggtacatcacttacattcatcaagcctaaataaaaaataa
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