Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2268
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Entry
HDEF_2268 CDS
T00911
Symbol
rtxA_27
Name
(GenBank) putative RTX-family protein-27
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C80
FAM110_C
Presenilin
CCDC53
Motif
Other DBs
NCBI-ProteinID:
ACQ68809
UniProt:
C4K8F3
LinkDB
All DBs
Position
complement(2038699..2041548)
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AA seq
949 aa
AA seq
DB search
MIPIIALSQNPIVNPVNLTPEFSISSILPTQRITKESTRKRKLEKTDLSDMNQKIPKVTE
KGQMPSFFIDITEPKSYGLEKSEYGNNTVYHQSRSTNNPNYPITALNYNNNMLSSYMQKT
INDSSKTLEERKKEIYKKVIGENLYGNIKLNLQGLSSFKMPGSTVKKLFYVNGKLIADII
NRKNDSGHVIKRVIEPMSGSAIYSNWIRLLGFKGKIIINDTNPFVILTQKAIINYPDEVL
KNIEVIKNDILNIAQKHGLNFNSELFIESNSSNINQTIKKIFRENIIYYFEESLIMLTSS
VSDNGRLILDIPQDPILAKHFNAYAAALYYIAQNSFHFKDDSSIDVKLNTPDTYVFNLPI
SIFVEQKNKTRIFPSIINHQKIKFINHIHKNTKKDTEFFNEDGWALLKRKNIGAGDLIIL
SDYLNNKYTNENEFYQKIKDDVIPAIKRGAQVLVINKFQKEIETFLKRQGFQVEKNENKG
NPTLLALSANIDTTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQTQT
HKLQSTYIDFLSDLYITQPGLSEPNRMIKNTETRFAGQIIVELEEDRVVSEAAKRLAGKH
AEKSLIIQLKKDGEYEVVKGNPYLLRGDLRWQVVGHSREGANEGYPGTFGGASAEQLSNQ
LIALHAQLKKQFRINPRPKYISLVGCSLAAAGVEDKSYARHFGKALKHQAGWQIDIGARR
LPVTVNAEGRKLSVVNEAASEEMPDKVVLSWTPEGELVVQKTRFSDRASGVLAPETLSSW
EPPLDSLVEPRSAVASLQTGLGDVPPALDRSSDAGEISLSRKALHQMGAMVEGQPFSPEH
FTKENGVQKLRFDAQRLAFYLHHADGGELSTQQAVRFLKQQLDVKSPPSLLEGDDKASTM
VALEQLNRINEHVQRGAPAPMTSSLDIPPALWGSLKSVLAPAGGGVSID
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgataccaatcatagccctcagtcagaacccgattgttaaccccgtcaatctcactcct
gaattctctatttcatcaatccttccaacacaaagaataaccaaagaaagcacgagaaaa
agaaagttagaaaaaacagatctatcagatatgaatcaaaaaataccgaaagtcacagaa
aaaggacaaatgccatcattttttattgatataacagaaccaaaatcatatggtttagaa
aaatctgaatatggaaataacactgtatatcatcaatcaagaagtacgaataatccaaat
tatcctatcacagccttaaattacaacaataatatgctttcgagctacatgcaaaaaaca
atcaatgattccagcaaaacgcttgaagaaagaaaaaaagaaatatacaaaaaagtaata
ggggaaaacctatatggtaatatcaagcttaatttacaaggcctgtcctcttttaaaatg
ccaggtagcactgtaaaaaaactattttatgtgaatggtaaattgattgcagatatcatt
aatcgtaaaaatgatagtggtcacgttatcaagcgcgtaatagaacctatgtctggatca
gcgatctattctaattggataagattattaggatttaaaggaaaaatcataataaatgat
actaatccttttgtgatcttaactcaaaaagcgattattaattatcccgatgaggtattg
aaaaatattgaagttattaaaaacgatatattaaatatagcccaaaaacatggattaaac
tttaatagcgaattatttattgaatcaaattcttcaaacataaaccaaactataaaaaaa
atttttcgtgagaatataatatattactttgaagaaagtttaattatgttaacttcttcc
gtaagcgataatggcagactgattttggatatacctcaggatccaattctagccaaacat
ttcaatgcctatgcagcggcattatattatattgcacaaaactcatttcattttaaagat
gattccagcattgatgtaaagcttaatacaccagatacatatgtgtttaatcttccgatt
tcaatttttgttgaacaaaaaaataaaacacgcatatttccatcgataattaatcatcaa
aaaataaagtttattaatcacattcataaaaatacaaaaaaagacacagaattttttaat
gaagatggctgggcgttattaaaaagaaagaatatcggtgctggtgatttaatcatatta
agcgattatctcaataacaaatatacaaatgaaaatgaattttatcaaaaaattaaagat
gatgtaataccggctattaaaagaggtgctcaagtactcgtaatcaataaatttcaaaaa
gaaatagagacttttttaaaacgccaagggtttcaggttgagaaaaatgaaaataaaggt
aatcctaccttattagcattaagtgccaatattgatacaactcaaactcaaactcaaact
caaactcaaactcaaactcaaactcaaacccaaacccaaacccaaacccaaacccaaacc
caaacccaaacccaaacccaaacccaaacccaaacccaaacccaaacccaaacccaaacc
cataaattgcaatctacctacatcgattttttatccgatttatacattacccagcctgga
ttatccgagccaaacagaatgattaaaaatactgagacccgttttgcaggacaaatcatt
gtggagcttgaagaggacagggtggtgagcgaagcggcgaaaagactggcaggcaaacat
gccgaaaaaagcctcatcatccagttgaagaaggacggggaatatgaggtggtgaaaggt
aacccgtatctgcttcgtggcgatttacgctggcaagtggtggggcatagtcgtgaggga
gcaaatgaggggtatcccggcacctttggaggtgccagcgccgaacaactgtcgaatcaa
ctcatcgcgttgcatgcacaactcaaaaagcagtttcgtatcaatccccgacccaaatac
atcagcctggtggggtgttcattggcggcagccggcgtggaagacaagagctatgcccgg
cattttgggaaagccctcaagcatcaggcaggatggcagatagatattggcgctcgtcgg
ctccctgtgacggtgaatgccgagggtagaaaactctcggtggtcaatgaagcggccagt
gaggagatgccggataaagtggtgctcagctggacgccagaaggcgaattagtcgtacag
aaaacccgtttttctgacagggcctctggggtgttggccccggagacgctgtcgagttgg
gagccgcccctggactctctggtggaaccgaggtctgccgtggcgtcattacaaacggga
ttaggggatgtgcccccggcgttggaccggtcatcggacgcaggggagatttccctgagc
agaaaggcattacatcagatgggggccatggtcgagggccagcccttctctcccgagcat
tttacaaaagaaaatggggtgcaaaaactgcggtttgatgcgcaacgtctggcgttttat
ttgcatcatgcggatggcggtgagctgagcacccaacaggccgtgcgttttttgaaacaa
cagctggacgtcaaaagcccgccctctctgctagagggggacgataaggcgtcgaccatg
gtggctttagagcaactcaaccggattaatgaacatgtccaacgaggggcgccggcgccg
atgacatcgagcctcgacatcccgccggcgctttgggggtcgttgaaaagcgtgctggct
cccgccggggggggcgtctcaatcgattga
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