Halalkaliarchaeum desulfuricum: AArcSl_0020
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Entry
AArcSl_0020 CDS
T06283
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcSl_0020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdf03021
]
AArcSl_0020
Transcription machinery [BR:
hdf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AArcSl_0020
Prokaryotic type
Archaeal type
TFB
AArcSl_0020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
OrfB_Zn_ribbon
zf-ribbon_3
RB_B
DZR
DZR_2
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AUX07678
UniProt:
A0A343TF06
LinkDB
All DBs
Position
complement(22859..23722)
Genome browser
AA seq
287 aa
AA seq
DB search
MSQARAAGCPECDGRLHADGDETVCSNCGLVVDADRIDRGPEWRSFADDDTNPERTGAPL
TRSRHDRGLSTEIGHTRVKGRKRRKFARLRRQHDRTKIRSKRERNQVYGFTEIRRMTDVL
GLPEHVRDQACTLFESAQGESLLRGRSIEGFASACLYAACRVAGLARTVEEVVDVAKATP
NEHEAAYDAMNRELGLPVGPVPPAEYLPRFASQLDVGPETERRARKLADRARDEGIDVGR
DPSGVAAACLYTAARVHGSSELTQQAAAEVADVTPVTIRNTFHDLRE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcacgagccgctggttgcccggaatgtgacggtcgactgcacgcagacggc
gacgagacggtctgttcgaactgtgggctggtcgtcgacgccgaccgcatcgatcgcggg
cccgagtggcgctcgttcgctgacgacgacacgaaccccgagcgaaccggcgcgccgttg
acccggtcgcgtcacgaccgtgggctctcgaccgagatcggccacactagggtgaaaggg
cgcaagcgtcgcaagttcgcgcgactccgcagacagcacgatcggacgaagattcgttcg
aagcgggaacggaaccaggtgtacggcttcacggagatccggcgtatgaccgacgtgctg
gggctacccgagcacgtgcgcgatcaggcgtgtacgctgttcgagtccgcccagggggag
tcgctgctccgcggccggtcgatcgaggggttcgcctctgcgtgtctgtacgcggcgtgt
cgggtcgcggggctggccaggaccgtcgaggaggtcgtcgacgtcgccaaagcaacgccg
aacgaacacgaggcggcctacgacgcgatgaaccgcgagctcggcctcccggtcgggccg
gttccaccggcggaatatctcccccgcttcgcgtcacagctggacgtcggccccgaaacc
gaacgccgggcccgaaagctggccgatcgcgcgcgcgatgaagggatcgacgtcggtcgc
gatcccagtggcgtcgccgctgcctgtctgtacaccgccgcgcgtgtgcacggttcctcg
gagctcacacagcaggctgcagccgaggtcgccgacgtaaccccagtgacgatccgaaac
acgttccacgacctccgggagtga
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