KEGG   Halalkaliarchaeum desulfuricum: AArcSl_0088
Entry
AArcSl_0088       CDS       T06283                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
hdf  Halalkaliarchaeum desulfuricum
Pathway
hdf03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hdf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AArcSl_0088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hdf03032]
    AArcSl_0088
DNA replication proteins [BR:hdf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     AArcSl_0088
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_30 RuvB_N DNAX_ATPase_lid AAA_5 AAA_22 AAA_25 AAA_16 AAA_28 nSTAND3 DUF815 AAA_assoc_2 RNA_helicase IstB_IS21 AAA_33 RsgA_GTPase AAA_14 NACHT Gp44_lid Zeta_toxin NPHP3_N AAA_7 Rad17
Other DBs
NCBI-ProteinID: AUX07746
UniProt: A0A343TF74
LinkDB
Position
complement(84928..86469)
AA seq 513 aa
MTDWTEAYRPRTLSEVRGNDKAREKLREWAENWDDHREAVVLYGSPGVGKTSAAHALASD
MGWKTVELNASDQRTADVIERFAGRAAKNATLAGSAAGGGARGGDTASRQLVILDEADNI
HGNYDRGGARAITRLVKEADQPIVLIANDYYEMSRGLRNACREIEFRDVSPRSIVPVLRN
ICRQENVDFESEALQRIAEQNAGDLRGAVNDLQAIAEGRDRITIEAVVTGDRDRTIGIFP
FLDAVLKEETPEEALQSGYDVDETPDDLAKWVEGNVLKAYDTGEAARAYEFLSNADVWLG
RVRATQDYSYWRYVTDNVAAGVAASRDGTKGGWTRWGRPQFWRSSDATAEEVVRKIAAAN
GSSMATARREILPYLSAVTHHCKPRELTVAMAAAYEFEEKHVSFVTGSGESTNKVQSIVE
DAESLREERIADHAGGAFEPRREVDDTESDVDDTESDIGSDGESDADPGDGDPGDGVPGD
GDPSEDKNREAETGDGENTDGEDDGQLSFGDFT
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgactgactggaccgaagcgtatcgtccccgcacgctctcggaggttcggggcaacgac
aaggcccgagagaagctccgcgagtgggcggaaaactgggacgaccaccgggaggcggtc
gtcctgtacggcagccccggcgtcggaaagacctcggcggcgcacgcgctcgcaagcgac
atggggtggaagaccgtcgaactgaacgcctccgaccagcgaaccgccgacgtcatcgag
cggttcgcgggacgggcggcgaaaaacgccacgctcgcggggagtgccgccggtgggggc
gcacgcggcggcgacaccgcctcgcggcagctggtgatcctcgacgaggcggacaacatc
cacggcaactacgatcgcgggggcgcacgggcgataacccggctggtgaaggaggccgac
cagccgatcgtattgatcgcgaacgactactacgagatgtcccggggactgcgcaacgcc
tgccgggaaatcgagttcagggacgtctccccccgatcgatcgtgcccgtgctgcggaac
atctgccggcaggagaacgtcgatttcgagtcggaggcgctccagcggatcgccgagcaa
aacgcgggcgacctccgcggggccgtaaacgatctccaggcgatcgcggagggacgcgac
cggatcaccatcgaggcggtcgtcacgggcgaccgggatcggacgatcggaatcttcccg
ttcctcgacgccgtattgaaagaggaaacccccgaggaggcgctccagtcggggtacgac
gtcgacgagacgcccgacgatctcgccaagtgggtcgaggggaacgtcctgaaggcgtac
gacacaggcgaggccgcccgcgcctacgagttcctctcgaacgccgacgtctggctcggc
cgggttcgagcgacccaggactactcgtactggcggtacgtcaccgacaacgtcgccgcc
ggtgtcgccgcctcgcgcgacggcaccaaaggtgggtggacgcggtggggacgcccgcag
ttctggcgctcctcggacgcgaccgccgaggaggtcgttcggaagatcgcggccgcgaac
ggttcgagcatggcgacggcccgccgcgagatcctgccgtacctctcggcggtcacccac
cactgcaagccgcgggagctcacggtcgcgatggcggctgcctacgagttcgaggagaaa
cacgtctctttcgtcaccggttcgggcgagtcgaccaacaaggtccagtcgatcgtcgag
gacgccgagagcctgcgcgaagagcggatagcggatcacgccgggggcgcgttcgaaccc
cgccgggaggtcgacgacaccgagtccgacgtcgacgacaccgagtcagacatcgggtcc
gacggcgaatccgacgcggatcccggcgatggcgaccccggcgatggcgtccccggcgat
ggcgaccccagtgaggataaaaaccgcgaggcagagaccggtgacggcgaaaatacggac
ggcgaggacgacggacagttgagtttcggcgacttcacctga

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