Halalkaliarchaeum desulfuricum: AArcSl_0356
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Entry
AArcSl_0356 CDS
T06283
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hdf
Halalkaliarchaeum desulfuricum
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdf03032
]
AArcSl_0356 (topA)
03400 DNA repair and recombination proteins [BR:
hdf03400
]
AArcSl_0356 (topA)
Enzymes [BR:
hdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AArcSl_0356 (topA)
DNA replication proteins [BR:
hdf03032
]
Prokaryotic type
DNA Topoisomerases
AArcSl_0356 (topA)
DNA repair and recombination proteins [BR:
hdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AArcSl_0356 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
NucS_N
HypA
Auto_anti-p27
DUF7351
Motif
Other DBs
NCBI-ProteinID:
AUX08009
UniProt:
A0A343TFY7
LinkDB
All DBs
Position
347321..348088
Genome browser
AA seq
255 aa
AA seq
DB search
MSSELRLFAGECTTTFEGTRSRTQHGYVVVMVKPDDTVLVHDADGYQPVAWLTRPDEATV
EHHGDGTDTGDAEFTITARTGDQNLTVESCGKGAVRTIPVGEAGVPVGDCVESDCAGTLA
RTGGDVACVDCGMRYGLPAGATVLEKRCDDCGLPQIRVERGETFEVCLDYSCESLNDRIR
ERYDRAFDCPDCDSDLRIRVTDGRPFFGCEGYPDCETAFSIPAGVVVGLCDCGLPVFETA
TGQRCLDGTCDSYRE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaactcagactgttcgcgggggagtgtacgaccacgttcgagggcacccgg
tcgagaacacagcacggatacgtcgtcgtgatggtcaagcccgacgacaccgtgctggtc
cacgacgcggacggctaccagccggtcgcgtggctaaccagacccgatgaggcgacagtc
gagcatcacggcgacgggacggatactggagacgccgagttcacgatcactgcccggacc
ggcgaccagaacctcaccgtcgagtcgtgcgggaaaggggccgtccgaacgattccggtc
ggggaagcgggagttccggtgggcgactgcgtcgagtccgactgtgcgggaacgcttgcg
agaaccggcggagacgtcgcctgcgtcgactgtgggatgcgctacgggctgcctgctggg
gcaactgtgctcgaaaagcggtgtgacgactgcgggctcccgcagatccgggtggagcga
ggcgagacgttcgaagtgtgtctcgattacagctgcgagtcgctgaacgaccggatccgg
gaacgatacgatcgcgcgttcgactgtcccgactgcgatagcgacctccggatccgggtc
acggacggccgcccgtttttcggctgcgagggctatcccgactgcgagaccgccttctcg
atccccgccggcgtcgtcgtcggcctgtgcgactgcgggctcccggtcttcgagacggcg
accggacagcgctgtctcgacgggacctgcgacagctaccgcgagtga
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