Halalkaliarchaeum desulfuricum: AArcSl_0578
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Entry
AArcSl_0578 CDS
T06283
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AArcSl_0578 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdf03021
]
AArcSl_0578 (rpoA2)
Enzymes [BR:
hdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AArcSl_0578 (rpoA2)
Transcription machinery [BR:
hdf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AArcSl_0578 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Intein_splicing
DUF2680
Motif
Other DBs
NCBI-ProteinID:
AUX08228
UniProt:
A0A343TGK6
LinkDB
All DBs
Position
complement(592410..594251)
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AA seq
613 aa
AA seq
DB search
MTETDYDNVTEDIEAIVEDTELPRRLRDEVYETIDRKCAEYGAITTEQASDIAEAVENRY
RQTRVDPLDPVGTVSAQSIGEPGTQMSVPYDERVIVRKDGESDIVDIGELVDGVIDSRET
RTFDGHEVALAPEGMEALSLGEDEQVRWKTVEEVSRHGTPDELLQFQLESGRTIRATKAH
SFVIKQNDEIVPVAGDSLDVGDELPVVGEFDPAIGRADFTAFEPEQTVTDGGVAVTTTAQ
DDRYDDTVVWDRIESIETVTSDYEHVYDLSVEGLETFTTAEGVVTHNTMNTFHYAGVAEI
DVTQGLPRLIELVDARKTPDTPMMTVHLDGEYAKEREKAHEVVWSIEATKILALGDVSTN
VADMLVQIDLNEETLLERWPTYDDPNVVAEEIAETIEDALGVDTRQQGTLVEFGPPSPSY
RQLLQLVEQLRDVVFKGIEEVDRVVIRKEEIDAGEEFVLYTEGSAFGDVLEIEGVDPTRT
TCNNIHEIYRTLGVEAARETIINETNTTLEEQGLGDVNVRHLMLVADIMTNRGTIESIGR
HGISGSKDSVLARAAFEVTVNHLLDAAIHGERDDLNGVIENVIVGKPISLGTGDVDLRMG
TTGGSGSPRTSDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccgactacgacaacgtcaccgaggacatcgaggcgatcgtcgaggacacg
gaactcccgcggcggctcagggacgaggtgtacgagacgatcgaccggaagtgcgccgag
tacggcgcgatcaccacagagcaagcaagcgacatcgcggaggcggtggagaaccggtac
cgtcagacgcgagttgatccactcgatccggtggggactgtgagcgcacagtcgatcggg
gaacccggaacgcagatgagcgttccctacgacgaacgcgtgatcgtccgaaaggacggc
gaaagcgacatcgtcgatatcggtgagttagttgacggcgtcatcgactcacgggaaaca
cggacgtttgacggacacgaggtcgcgctggcccccgagggaatggaggcgctaagcctc
ggcgaagacgaacaggtacgctggaaaaccgtcgaggaggtcagccggcacgggacgccc
gatgaactgctccagttccaactcgaatccggccgaacgattcgggcgacgaaggcgcac
tcgttcgtgatcaaacagaacgacgaaatcgttccggtcgccggcgactcccttgacgtc
ggtgacgaactccctgtcgtgggtgagttcgatccggccatcggacgtgccgacttcact
gctttcgaacccgaacagacggtaaccgacggcggtgtggcggtgacgacgactgctcaa
gacgacaggtatgacgatacagtcgtctgggatcgaatcgagtcgatcgagacagtcacc
agcgactacgaacacgtgtacgatctctcggtcgaaggactggagacgttcacgaccgcg
gaaggtgtcgtgactcacaacaccatgaacaccttccattacgctggcgtcgccgaaatc
gacgtcacgcaggggctaccccggctcatcgagctggtggacgcccggaagacgccggac
acgccgatgatgaccgtccatctcgatggcgagtacgccaaggagcgcgagaaggcacac
gaggtggtgtggtcgatcgaggcgacgaagatcctggcgctgggtgacgtctcgacgaac
gtcgccgacatgctggtccagatcgacctcaacgaggagacgctgctggagcggtggccc
acctacgacgacccgaacgtcgtcgcagaggagatcgccgagacgatcgaggacgcgctg
ggggtggacacccgccagcaggggacgctcgtggagttcggcccgccgagtccctcctac
cggcagctgctgcagcttgtcgaacagctccgggatgtcgtcttcaagggcatcgaggag
gtcgaccgcgtcgtcatccggaaagaagagatcgacgccggcgaggagttcgtcctctac
accgaggggtcggcgttcggggacgtcctcgagatcgagggcgtggacccgacccggacg
acgtgcaacaacatccacgagatctaccggacgctcggcgtcgaggccgcccgcgagacg
atcatcaacgagacgaacaccaccctcgaggagcaggggctgggcgacgtcaacgtccga
cacctgatgctggtggccgacatcatgacgaaccgcggcacgatcgagtcgatcggccgc
cacggcatctccggctcgaaggactccgtgctcgcacgggcggccttcgaggtgacggtg
aaccacctgctggacgcggcgatccacggcgagcgggacgacctcaacggtgtcatcgag
aacgtcatcgtcggcaagccgatctcgctgggaaccggcgacgtcgatctccggatgggg
accaccggcggctccggctccccacggacctcggacgactga
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