Halalkaliarchaeum desulfuricum: AArcSl_1453
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Entry
AArcSl_1453 CDS
T06283
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AArcSl_1453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdf03019
]
AArcSl_1453
03009 Ribosome biogenesis [BR:
hdf03009
]
AArcSl_1453
04131 Membrane trafficking [BR:
hdf04131
]
AArcSl_1453
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdf04147
]
AArcSl_1453
Messenger RNA biogenesis [BR:
hdf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AArcSl_1453
Ribosome biogenesis [BR:
hdf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AArcSl_1453
Membrane trafficking [BR:
hdf04131
]
SNARE
SNARE associated proteins
Others
AArcSl_1453
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AArcSl_1453
Exosome [BR:
hdf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AArcSl_1453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
nSTAND3
AAA_14
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
AAA_7
Mg_chelatase
ATPase
DUF815
AAA_17
ABC_tran
AAA_3
NB-ARC
AAA_24
Sigma54_activat
Parvo_NS1
AAA_30
AAA_11
TsaE
AAA_18
PhoH
AAA_lid_PRS2_C
SLFN-g3_helicase
Zeta_toxin
NACHT
Vps4_C
IPT
Zot
Motif
Other DBs
NCBI-ProteinID:
AUX09083
UniProt:
A0A343TJ11
LinkDB
All DBs
Position
complement(1492013..1494442)
Genome browser
AA seq
809 aa
AA seq
DB search
MRATRAARVARKRTVPDGSGPVVPEQSTYSATERNHARKRDEKRRDEKRRDEKRRDEKRR
DNEQNPTRSMNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGGEMTAAKV
WRADRQDWNTDTVRVDGFTRQNANVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDA
AGMVKRQILKRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVSTEPEGVCLITEDTEVEL
REEPISGFEKTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGP
PGTGKTLLAKAVANETAASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDEL
DSIAPKREDVTGEVERRVVAQLLTMMDGLETRGQVIVIAATNRVDSVDPALRRPGRFDRE
IEIGVPDEGGRKEIMQIHTRGMPLSDDVSLDRLADETHGFVGADIESLTKEAAMKALRRY
LPEIDLDEEDIPPSLIDRMIVKRADFNGALSEVEPSAMREVLVELPKITWDDVGGLEDAK
QQVKESVEWPLSKPEKFERMGIQAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQ
LLSKWVGESEKAIRQTFRKARQVSPTIVFFDELDSLAPSRGQDAGSNVSERVVNQLLTEL
DGLEEMGEVMVIGATNRPDMIDPALIRSGRFDRLVMVGSPDEEGREQILKIHTRESPLSP
DVSLREIAEITDGYVGSDLESIAREAAIEALREDDDADVVEMRHFRQAMDSVRPTITDEI
LSYYEEIEDQFRGGGADAMRERGGRIGFQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggccacccgagcggcgcgagtcgcccgaaagcggactgtcccggacggttcgggg
ccggtcgtcccggaacaaagcacttattcggcgactgagaggaatcatgcacgcaaacgc
gacgagaaacggcgtgacgagaaacgacgcgacgagaaacggcgcgacgagaaacgacgc
gacaacgaacagaacccaactcgaagcatgaacgaagttcaactcgaagtggcgaaggcg
tacccgaacgactcgggacgcggcatcgcccgtctcgacccagacacgctcttgcatctc
aagctctcccccggcgacatcatcgagatcgagggtggtgagatgaccgcagcgaaggtg
tggcgagcggaccggcaggactggaacaccgacacggtccgcgtcgacggcttcacccgc
cagaacgccaacgtcggcatcggcgagcgcgtgacgatccggaaggcggaagccgaaaag
gccgacaagctcgttctcgcgccacccgaggaggcgtccgtgcagttcggctccgacgcc
gccggcatggtgaaacggcagatcctcaagcggccggtcgtcgaacgcgacatcgttccg
gtgatgtcgagcacgaaccacccgttcatgcgctcgcccgggcaggcgatcccgctgatc
gccgtctccacggagccggagggcgtctgtctcatcaccgaggacaccgaggtcgaactc
cgcgaggagccgatctccggcttcgagaagaccggcggcggcatcacctacgaggacatc
ggcggcctgcaaagcgagatccagcgcgtccgggagatggtggaactgccgatgaagcac
ccccagatcttcaagaagctggggatcgaaccgccccagggtgtccttcttcacggtcca
cccgggaccggcaagaccctccttgccaaggcggtcgcaaacgagacggcggcgtcgttt
ttctcgatcgccggcccggagatcatctcgaagtactacggcgagagcgaacagcagctc
cgggagatcttcgaggacgccaaagaggagtcgccgtcgatcatcttcatcgacgaactg
gactccatcgcgcccaaacgcgaggacgtcaccggcgaggtggagcgccgtgtcgtcgcc
cagctgctcacgatgatggacggcctcgagacccggggccaggtgatcgtcatcgcggcg
acgaaccgcgtcgacagcgtcgatcccgccctgcggcgtcccggccggttcgaccgggag
atcgagatcggcgtccccgacgaggggggtcgcaaggagatcatgcagatccacacccgc
gggatgccgctgtccgacgacgtgagcctcgaccggctcgctgacgagacccacggcttc
gtcggcgccgacatcgagagcctcaccaaggaggcggcaatgaaggcgctgcggcgctac
ctcccggagatcgacctcgacgaggaggacatcccgccgagcctcatcgatcggatgatc
gtgaagcgggccgacttcaacggcgccctctcggaggtagagccctccgcgatgcgggag
gtgctggtcgaactcccgaagatcacctgggacgacgtcggtgggctcgaggacgcgaaa
cagcaggtcaaagagagcgtcgagtggccactctcgaagccggagaagttcgagcgcatg
gggatccaggcgccgaagggcgtgctgctttacggcccgcccgggaccggcaagacgctg
atggcgaaagcggtcgccaacgaaaccaacgccaatttcatctccgtgcgcgggccgcag
ttgctctcgaagtgggtcggcgagtccgagaaggcgatcagacagacgttccggaaggcc
cgccaggtgagtccgacgatcgtcttcttcgacgaactggactcgcttgccccctcgcgg
ggtcaggacgccggcagcaacgtctccgaacgggtcgtcaaccagctgctgaccgaactc
gacggcttagaagagatgggcgaagtgatggtgatcggcgcgaccaatcgcccggacatg
atcgacccggcgttgatccggtcgggccggttcgaccggctggtgatggtcggctccccc
gacgaggagggtcgcgaacagatactcaagatccacacgcgcgagtcgccgctgtcgccg
gacgtgagcctgcgcgaaatcgccgagatcaccgacggctacgtcggctcggacctcgag
tcgatcgcccgcgaggccgccatcgaggcgctccgggaggacgacgacgccgatgtggtc
gagatgcgccacttccggcaggcgatggactccgtccgtccgaccatcaccgacgagatc
ctcagctactacgaggagatcgaagaccagttccgcggcggcggggcggacgcgatgcgg
gagcgtggtggccggatcggattccagtaa
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