| Entry |
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| Symbol |
pcrA
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| Name |
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
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| KO |
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| Organism |
hdf Halalkaliarchaeum desulfuricum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hdf00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AArcSl_2240 (pcrA)
03430 Mismatch repair
AArcSl_2240 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:hdf03400]
AArcSl_2240 (pcrA)
Enzymes [BR:hdf01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AArcSl_2240 (pcrA)
DNA repair and recombination proteins [BR:hdf03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AArcSl_2240 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AArcSl_2240 (pcrA)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2254000..2257452
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| AA seq |
1150 aa
MSNDTDEYPSWFPVPEEDVSPEPQQQRIINSDAYPMRVLAGAGTGKTFTMVRKIEHLIDE
EDVSPDRILALTFTNNAANSMQEKLNAKLGVAGYDIDAYTYHSICNEILSDYAYEAGLDP
DFEVATDAEKYAIVLDVLDEIEYRAVKPNVYGDNGYASGAASKLLNFIGSMKRNGITPED
IDEFLGPAARVYELVDVRERIEAIASDHLGGRSVSSVLDSLPDARAELVTERDALGRDGM
EASVRDFLDRLVDLCEALEAAFEAHEAGERELPDNAYKLPKYMLGGYASGAPTGIPGNLD
LELTDHLDSFLSDCLTARDLTAGYAAYERELDERNLIDFDGLVVETAALMDSPVGEEIAD
RWDYVFCDEFQDTDRLQFDLVTSLVTDDNLFVVGDDDQAIYEWRGAHVANITDELDRAFT
ALTDEPLEENFRSRQPILDLANEAIQKLDHRERHKTLKRVDEPAYDGDSVATVELQDEDD
ADGAAQLRTVVQNLLSGAAENLDEAYDPGDIALLVRKNDHATPVIEEFDDAGIPYQVAGN
LATESVGVRTVTAYLKALARPEDEVSWNRVLLMRYRLCDADLRTLNVGDDPLVDTLRTTP
LDEFEEPDRVAEAREHATELLNLRDSASLSHLYRELTDLTNIEWYLSEQERRDLTQLENV
IEQYGDSAVQPPLTPEFIDSLEHYDSLFDESGTTPTSQPDVADDAVNVMTIHKSKGLDFP
VALIPQVTADEWAPSSRTYDALETGLSDGADAAFAEDFVERDSRETRRVFHVGITRAEDI
LVLQGGSEEDDDADLHPVSETVDEILPPRIPWQAERGQLPLWDDVQECLLDKAVDWTNTL
ASETVGNIGGAVTHDGEDLSVEAARDRVLTLATATLDGSLSPRTEREILRVASLTGPATH
SPSLSHSYTSLAAYEECPRNHYLEYVVNAFSDYQETTSGPGGGVSQREIGLLFHDTAEQA
ANQEIEHREEWYEICERLASQRRAEDALPAAKQCIDRYFELALSSYEVVDAERKFELDIN
GHELVGYIDAVYRTPDDELLVIDYKATERHRDLQDDKQLPIYLLACRDLYDEPVARAGYA
YVGEIGPKIESRPFSDAELETVRNDVTEAMDRIAEFSFSRYSAGDHCQWCQHNQLPCAPD
SFTVGPGFEE |
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| NT seq |
3453 nt +upstreamnt +downstreamnt
atgagcaacgatactgacgagtacccctcgtggttccccgttccggaagaagacgtttcc
ccggagccccaacagcagaggatcatcaactccgacgcctacccgatgcgtgtactcgcc
ggggcagggaccgggaagaccttcacgatggtgcggaagatcgagcacctcatcgacgag
gaggacgtgtctccggatcgaattctcgcgttgacgttcacgaacaacgccgcgaactcg
atgcaggagaaactcaacgcaaaactcggagttgctgggtacgacatcgacgcgtacacg
tatcactcgatttgtaacgagattctctctgactacgcctacgaagccggccttgacccc
gacttcgaggttgccacggacgccgagaagtacgccatcgtgctggacgtgcttgacgag
atcgagtaccgggcagtcaaaccgaacgtgtacggagataacgggtacgcgtccggagcg
gcatcgaaactcctcaatttcatcgggtcgatgaaacgaaacggcatcacgcccgaagac
atcgacgaattcctcggtcctgctgcccgcgtctacgaactcgtcgacgttcgggagcga
atcgaggcgattgccagcgaccacctgggtggccgttcggtttcgagcgtgctggactcg
ctcccagatgcacgcgcagagctcgttacggaacgtgacgcgctagggagggacggcatg
gaagctagcgtgcgcgatttcctcgaccgactcgttgacctctgtgaggcgctggaagcc
gcgttcgaggcccatgaagcgggcgagcgagaactaccagacaacgcgtataaactcccg
aaatacatgctcggcgggtacgcaagcggcgcgccgacagggattccagggaacctcgat
cttgaactcacagatcacctcgattcgttcctctctgactgtctcactgcccgtgacctg
acggcagggtatgcggcgtacgagcgagaactcgacgagcggaatctcatcgacttcgac
ggcctggtcgtcgagacagctgcactgatggattcgccggtcggtgaggaaatcgccgac
cggtgggactacgtgttctgtgacgagttccaggacacggaccgcctccagttcgacctc
gttacgtcactcgtcacggacgacaacctgttcgtcgtcggtgacgacgaccaggcgatc
tacgagtggcgcggcgcacacgtcgccaacatcaccgacgaactcgaccgagcattcacg
gcactcactgacgaaccgctggaggagaacttccgctcccgacaaccgatcctcgatctg
gcgaacgaggcgattcagaaactcgaccaccgcgaacgacacaagacactgaaacgcgtc
gacgaacccgcgtatgacggggacagtgtcgctaccgtcgaactccaagacgaggacgac
gcagacggcgcggcccaacttcgtaccgtcgtccagaatctattgagcggtgcagcagaa
aacctcgacgaggcgtacgatccaggtgacatcgccctcctcgtccggaaaaacgaccac
gcgacacccgtcattgaggaattcgacgatgctggcatcccgtaccaagttgctggcaat
ttggccaccgaatcagtcggcgtcaggactgtcaccgcctatctgaaagcgctcgctcga
cccgaagacgaggtgagttggaatcgcgtcctcctgatgcggtaccggctctgtgacgca
gacctccgcacgctcaacgtcggcgacgacccgctcgtcgacacgctccgtaccacaccg
ctcgacgagtttgaggaacccgaccgcgtcgcagaagcccgtgagcacgccacggaactg
ctcaacctccgtgactcggcatcactcagtcacctgtaccgcgaactcacggatctcacg
aacatcgagtggtatctcagcgagcaggagcgccgcgatctcacccagcttgagaacgtc
atcgaacagtacggggacagtgccgtccaaccaccgctcaccccggagttcatcgactcg
ctcgaacactacgactccctgttcgacgaaagtggcaccacacccacgagccaaccggac
gtcgcagacgacgcggtcaacgtgatgaccatccacaagagcaaggggctggacttcccc
gtcgccctcatcccgcaagttactgccgacgagtgggcaccgagctcacgcacgtacgac
gcgctcgaaacgggactctcggacggtgcagacgcggcgttcgccgaggactttgttgag
cgtgattcccgtgagacacgccgtgtattccacgtcgggattacacgcgccgaagacatc
ctcgtcctacagggtggaagcgaggaagatgacgacgcggacttacatccggtttcagag
acggtcgacgagattctgccaccccgaatcccgtggcaggcagagcgaggacagctccca
ctctgggacgacgttcaggagtgtctcctggacaaggcagtagactggaccaacacgctg
gccagcgagactgtcggaaacatcggcggtgccgtcactcacgatggggaagatctcagc
gttgaggctgcgcgcgaccgcgtgctaacccttgctacggccacccttgacgggagtctc
tcaccgagaaccgagcgggagatccttcgggttgcgtcgctgactggcccggcgactcat
tcaccatcgctctctcacagctacacgtcgttagcggcctacgaggagtgcccacggaat
cactacttggagtacgtcgtcaacgccttctccgattaccaggagaccacgagtggtccc
gggggtggtgtgtcacaacgcgaaattggattactgtttcacgacaccgcagagcaagcc
gcgaatcaagagatagaacaccgtgaggagtggtacgagatctgcgagcgactcgccagc
cagcgtcgcgccgaggacgcgctcccggcggcgaaacagtgcatcgaccggtacttcgag
ttagcgctctccagttacgaagtcgtcgacgcagaacggaaattcgaactcgatattaat
gggcacgagctcgtcggctacatcgacgcagtctaccgaacaccggacgacgagctcctc
gtcatcgattacaaagcaacggagcgccaccgtgacctgcaagacgacaagcaactgccg
atctatctattagcgtgccgcgacctgtacgacgagccagtggcacgcgcgggatacgct
tatgtcggagaaattggcccgaagatcgagtcccgaccgttcagcgacgctgagctagaa
acagtcagaaacgatgtaacggaggcaatggaccgcattgctgagttctcattcagtcgg
tacagtgctggcgaccactgtcagtggtgtcaacacaaccaactgccttgtgcaccggac
tcgttcaccgtcgggcctggattcgaagagtag |
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