Halalkaliarchaeum desulfuricum: AArcSl_2279
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Entry
AArcSl_2279 CDS
T06283
Symbol
rad2
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03030
DNA replication
hdf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AArcSl_2279 (rad2)
03410 Base excision repair
AArcSl_2279 (rad2)
03450 Non-homologous end-joining
AArcSl_2279 (rad2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdf03032
]
AArcSl_2279 (rad2)
03400 DNA repair and recombination proteins [BR:
hdf03400
]
AArcSl_2279 (rad2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdf04147
]
AArcSl_2279 (rad2)
DNA replication proteins [BR:
hdf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
AArcSl_2279 (rad2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
AArcSl_2279 (rad2)
DNA repair and recombination proteins [BR:
hdf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
AArcSl_2279 (rad2)
Exosome [BR:
hdf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AArcSl_2279 (rad2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DUF4420
Phasin
Motif
Other DBs
NCBI-ProteinID:
AUX09903
UniProt:
A0A343TLD1
LinkDB
All DBs
Position
complement(2296822..2297802)
Genome browser
AA seq
326 aa
AA seq
DB search
MGNADLRALASIREVTFDELEGTLVAVDAHNWLYRYLTTTVKFTDERVYTTGDGKEVANL
IGIVQGLPKFFEHDLTPVFVFDGGVTELKSDEVQRRREKRESAEEQLEDARDRGDTIAAA
RLEARTQRLTDVIQETTRGLFDRLDVPYVEAPAEGEAQCAYMARIGDVDYAGSEDYDTLL
FGAPLTLRQLTSSGNPELMDLETTLAELDLTLEQLVDVAILCGTDFNEGISGVGPKTAVR
EIKEHGDLWGVLDARGTEIPDAEQVRQLYFDPPVTTEYEFDDPIDPDFPAAKQYVTDEWE
IPTDEVARGFERLEEGLTQTGLDRWT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgccgatctcagagcgctcgcgtcgatccgggaggtgacgttcgacgagctc
gaaggaaccctggtagctgtcgacgcccacaactggctgtaccggtatctcacgacgacg
gtgaagttcacagacgaacgcgtctacacgactggagacggcaaggaggttgccaacctg
atcggaatcgtgcaggggcttccgaagttcttcgagcacgatctgacgccggtgttcgtc
ttcgacgggggcgtcactgagctcaaaagcgacgaggtacagcgccgccgagaaaaacgg
gagtcggccgaagagcaactcgaagacgcacgggatcggggcgacacgatcgcggctgca
cggctcgaagcacgaacacagcgactcaccgacgtgatccaggagacgacgcgggggctg
ttcgatcggctcgacgtcccgtacgtcgaagcaccggcggaaggagaagcccagtgtgcg
tacatggcgcggatcggcgacgtagattacgccgggagcgaggactacgacacgctgctt
ttcggggcacccctcacgctcagacaactgacgagctccggcaatccggaactgatggac
ctcgagacgacgcttgctgagctggatctcaccctcgaacagctcgtcgacgtcgccatc
ctgtgtggcaccgatttcaacgaagggatctccggcgtcggcccgaaaaccgccgtacgg
gagatcaaagaacacggcgatctgtggggagttctcgacgcacgaggcacagaaatcccc
gacgcagagcaggttcgacagctgtacttcgatccaccagtcacgaccgaatacgagttc
gacgacccgatcgaccccgacttccctgccgcgaaacagtacgtaaccgacgagtgggaa
atcccgaccgacgaggtagcccgcgggttcgaacgtctcgaggagggactcacgcagacc
ggactcgatcggtggacgtaa
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