Halalkaliarchaeum desulfuricum: AArcSl_2332
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Entry
AArcSl_2332 CDS
T06283
Symbol
mscS4
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K03442
small conductance mechanosensitive channel
Organism
hdf
Halalkaliarchaeum desulfuricum
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdf02000
]
AArcSl_2332 (mscS4)
Transporters [BR:
hdf02000
]
Other transporters
Pores ion channels [TC:
1
]
AArcSl_2332 (mscS4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
DUF6338
Motif
Other DBs
NCBI-ProteinID:
AUX09954
UniProt:
A0A343TLI2
LinkDB
All DBs
Position
complement(2352368..2353321)
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AA seq
317 aa
AA seq
DB search
MACPVAMAAVGADALFEPTIAAGQTVPLQIDPVQNVLAEYVSEDLAGTLTSAGVFLVVLV
VFYVLDKAFFSPLIDRVFERRQLDAHARNPLNKIVSIVVLFVGLSVAFGFAGYGNFLQSL
ATIAAAATLAIGFALQDVIRNFVSGIFIFTDKPFKIGDWIVWGDNDGVVEDISFRVTRVR
TFDNELLTVPNSDLTDGVIKNPVAKDTLRLKFVFGIDYEDDIDHATELILEEAADHPDIL
EEPAPSVRLTELADSAVGLQARVWIANPSRSDFIRTRAEFATSVKKRFDAEDITIPFPQR
TVSGRGAREQPASLTEE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtccggtcgcgatggctgcagtcggagcggacgcgctgttcgagccgacaatc
gcggcgggtcagacagtgccgttgcagatcgatccggtccagaacgtcctcgctgagtac
gtcagcgaagatctcgccgggacgctcaccagtgcaggggtgtttcttgtcgtcctggtc
gtcttttacgtgctggacaaagcgttcttcagtccgctcatcgaccgggtgttcgaacgg
cggcagctggatgcacacgccagaaacccgctgaacaagatcgtctcgatcgtcgtcctc
ttcgtcggcctcagcgtcgcgttcggctttgctggatacggtaatttcctgcaatcgctg
gcgacgatcgccgccgcggcgaccctggcgatcggcttcgcactgcaggacgtcatccgg
aacttcgtttcgggcatattcatcttcacggacaaaccgttcaagatcggcgattggatc
gtctggggcgacaacgacggtgtcgtcgaggacatctcgttccgtgtgactcgtgtccgg
acgttcgacaacgaactgctcacggttccgaactccgatctgaccgacggtgtcatcaaa
aaccccgtggcgaaggatacgctccggctcaagttcgtgttcgggatcgactacgaggac
gacatcgaccacgcgacggagctcatcctcgaggaggctgccgaccatcccgacatcctg
gaggagcccgctccgtcggttcggcttacggaactcgcagactcggcggtcgggctccag
gcccgcgtgtggatcgcgaacccctcgcgctcggacttcatcaggactcgtgccgagttc
gcaacgagcgtgaaaaagcggttcgacgcggaggacatcacgatcccgttcccacagcgg
accgtctccgggcgcggtgcgcgggaacagcccgcgtcgctgacggaggagtag
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