Halalkaliarchaeum desulfuricum: AArcSl_2628
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Entry
AArcSl_2628 CDS
T06283
Symbol
sbcC
Name
(GenBank) DNA repair protein SbcC/Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hdf
Halalkaliarchaeum desulfuricum
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdf03400
]
AArcSl_2628 (sbcC)
DNA repair and recombination proteins [BR:
hdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AArcSl_2628 (sbcC)
Archaeal homologous recombinant proteins
AArcSl_2628 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_13
AAA_21
SMC_N
AAA_15
AAA_27
AAA_29
CENP-F_leu_zip
Crescentin
NPV_P10
MAD
ABC_ATPase
Fib_alpha
GAS
CCDC93_CC
HrpB7
MscS_porin
ATG14
FliJ
Alanine_zipper
FapA
DUF1664
Laminin_II
DUF745
ABC_tran
ZnF_RZ-type
Filament
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AUX10247
UniProt:
A0A343TMC5
LinkDB
All DBs
Position
complement(2661165..2663843)
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AA seq
892 aa
AA seq
DB search
MRFERLELTNFKPYADAEVRLRDGVTVIHGLNGSGKSSLLEACFFALYGAKALDGTLEEV
VTNGQEETEIELAFHHDGNDYRIYRRIRASGDRVSTVDCTLDGPDVTVDGARDVRRFVTE
LLRMDAEAFLNCAYVRQGEVNKLINASPSQRQDMIDDLLQLGKLETYRERAGDARLGVED
LLNSKRTLLEDKTDRIERKENADLHGRLNELESRLGEVDDEIERVESQIDEAEETKANAE
RVLEEYEEKTAEIEALDGEIEEIEETIREAETERETLRERITETRERIDDLESELETARD
DAELEAATDEAIAARRDVLDDREADLEEQLSDLRVTQEGFRNQATNLAEKATTLENRAEE
TESDAAEAESDAATADRTAQEHEEKLESIDGEIDTVRDQFDEADVEPGTADGLREEIQSE
LSTARERVAELETELSNARERVAEVEELLAAGKCPECGQPVEGSPHVDSIDEDRERVAEL
ETELSDARDAVSRLEERLADAEELREAEQRLAELENAKELREERLTNARETAEERRERAE
TLREKADELREQAAEAAEVAETKREEAAETRERIEHLEGKLETIESERETLSSIESTLEE
IDELEERIDRHRERRSTLEELNDERRERLREKREARDELRESFDDDRVEAARENKRTAEA
YLEEAKPELEGLEETRDELQNSIGGVKKELSELERLREERDQLAERVDALESVHEEAESL
EQLYGDLRAELRQRNVETLEGMLNETFELVYGNDAYSHIELDGEYELTVYQKDGEPLEPA
QLSGGERALFNLALRVAIYRLLSAGIEGAAPTPPLILDEPTVFLDAGHVSRLVTLVEEMR
EFGVRQIVIVSHDEELVAAADDLLTVEKDATTNRSSVRREEMPAIPSLAGDD
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgagcgcctcgaactaacgaacttcaagccgtatgccgacgcggaggtacga
ctccgggacggcgtcactgtgattcacgggctcaacggcagcgggaaatcgtcgctcctg
gaggcgtgtttcttcgcgctgtacggcgcgaaggcgctcgacggcaccctcgaggaggtg
gtcaccaacgggcaagaggagaccgaaatcgaactggcgtttcaccacgacggtaatgac
taccggatctaccgccggatccgcgcgagcggcgaccgggtgagcaccgtcgattgcacc
ctcgacggaccggacgtcaccgtcgacggggcgcgcgacgtccggcggttcgtcaccgaa
ctgctccggatggacgcggaggcgtttctcaactgcgcgtacgtccgacagggggaggtg
aacaagctgatcaacgcgagcccgagtcagcgacaggacatgatcgacgacctgctgcag
ctcgggaaactcgaaacctaccgcgagcgggccggcgatgcgcggctcggggtcgaggac
ctgctcaattccaaacggacgttactggaggacaaaaccgaccgaatcgaacggaaggaa
aacgccgacctccacggccggctcaacgaactcgaatcgcggctcggcgaggtcgacgac
gagatcgaacgggtcgaatcgcagatcgacgaggccgaagagacgaaagccaacgcagag
cgcgtactcgaagagtacgaagagaaaacggccgagatcgaggcgttagacggcgaaatc
gaggaaatagaggaaacgatacgggaggccgaaaccgagcgagaaacgctccgagaacgg
atcaccgagaccagagaacgcatcgacgacctcgaaagcgaactcgagacggcccgggac
gacgcagagctcgaggctgcgaccgacgaggcgatcgccgcccgtcgggacgtactcgac
gacagggaggccgacctcgaagagcaactgagcgatcttcgggtaacccaggaggggttc
cggaaccaggcaacgaacctcgccgagaaggcgacgacgctcgaaaaccgggccgaggag
accgaatcggacgcagcggaggcagaatccgacgcggcgacggccgaccggacggcacag
gaacacgaggaaaagctggagtcgatcgacggcgagatcgacactgtccgggatcagttc
gacgaggcggacgtcgaacccggtaccgccgacggcctgcgcgaggagatccagtcggaa
ctgtcgaccgcccgcgaacgcgtcgccgaactcgagaccgaactgtcgaacgctcgcgag
cgcgtcgcggaggtcgaagagttgctcgcggccggcaagtgcccggagtgtggacagccg
gtcgaaggctccccgcacgtggattcgatcgacgaggaccgcgaacgcgtcgccgaactc
gagaccgaactgtccgacgcacgcgatgcggtgagccgtctcgaagagcgactggcggac
gctgaagaactccgcgaggccgaacagcgtctcgcggagctggaaaacgccaaagagctc
cgcgaggagcggctcacgaacgcccgggagacggccgaagagcgacgagagcgggccgaa
acgcttcgtgagaaggccgatgagctgcgggaacaggccgccgaggccgcggaggtcgcc
gagacgaaacgggaggaggcagccgagacccgagagcgcatcgagcacctcgaaggaaaa
cttgaaacgatcgagtccgaacgggagacgctctcgtcgatcgagtccacgctcgaagag
atcgacgaactggaggagagaatcgaccgccaccgcgaacggcggtcgacactcgaggaa
ctgaacgacgaacggcgagagcgtctccgggaaaagcgcgaggcgagggacgaactccgg
gagtcgttcgacgacgaccgggtcgaagcggccagagagaacaaacgaacggccgaggcg
tacctcgaagaagcgaaacccgaactcgaggggctcgaggagacgagagacgaactccag
aactcgatcggcggcgtaaaaaaggagctgtcggaactcgaacgcctgcgggaagagcgg
gaccagttggccgaacgggtcgacgccctggagtcggtccacgaggaggccgagtcgctc
gaacagctgtacggcgatctccgtgcggagttgcgccagcggaacgtcgagacactcgag
gggatgctcaacgagacgttcgaactcgtgtacggcaacgatgcctactcgcacatcgaa
ctcgacggcgagtacgaactcacagtgtaccagaaggacggcgaaccgctcgagcccgca
cagctttcagggggagagcgggcgcttttcaacctggcgttgcgggtcgcgatctaccgg
ctgttgtcggccgggatcgaaggggccgcaccgacaccgccactcattctcgatgaaccg
accgtgttcctcgacgccggccacgtttcccggctggtcacgctcgtggaggagatgcgg
gaattcggggtccgccagatcgtgatcgtgagtcacgacgaggagctcgtcgcggccgca
gacgacctgctcaccgtcgagaaggacgcgacgacgaaccgctcgagcgtccgacgcgag
gagatgccggcgattccgtcccttgcaggagacgattga
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