Halalkaliarchaeum desulfuricum: AArcSl_2853
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Entry
AArcSl_2853 CDS
T06283
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03022
Basal transcription factors
hdf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcSl_2853
09124 Replication and repair
03420 Nucleotide excision repair
AArcSl_2853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdf03021
]
AArcSl_2853
03400 DNA repair and recombination proteins [BR:
hdf03400
]
AArcSl_2853
Enzymes [BR:
hdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AArcSl_2853
Transcription machinery [BR:
hdf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AArcSl_2853
DNA repair and recombination proteins [BR:
hdf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AArcSl_2853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
MarR_2
AAA_22
AAA_30
AAA
DUF4283
TrmB
Ribosomal_S25
HTH_PafC
AAA_11
IstB_IS21
HTH_39
AbiEi_4
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AUX10468
UniProt:
A0A343TMZ6
LinkDB
All DBs
Position
complement(2897321..2899213)
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AA seq
630 aa
AA seq
DB search
MTDGGDSDAEGNAPDTDTEGNPSDPDADATPIQLSRFLDVVEREERPVLTAQQAARRLDC
TQAQARDALDDLARRGEIERVDVETDPVVYYPTEWRKLARRERVVVFPTRREIVVDQPTQ
YTRAQLTQFAHLVDTTGTDPGTRGYLYRVRPEDVWVAPFEEFEELLSTVRSALPRRYSHL
EEWMEDQWERAHQFRLYTHEDGYVVLEAASESLMGNVAEEKLDEDAIRAPISDTEAWING
DRIAGIKRTLYDAGYPVVDDRELETGDGLDVELTTDLREYQQSWVESFLDKQAGVFVGPP
GSGKTVAAIATIAAVDGETLILVPSRELAEQWREELLAHTDLTREQIGAYHGGEKRIRPV
TIATYQTAGMDRHRQLFDSRKWGLIVYDEVHHVPSDVYRRSADLQAVHRLGLSATPVRED
ESEAEIFTLIGPPIGTDWDALFEAGFVQEPELEIRYVPWRDDTARNEYTSTDGRERYRLA
AQNPAKLDEVEYLLARHDDRKALVFVDYLDQGEKIAEALSVPFVSGDTPHYRREQLFSEL
REGTRRTLVVSRIADEGIDLPDAEVAILASGLGGSRRQGAQRAGRTMRPAGSALVFVLAT
RGSREEEFARRQLRHLAGKGIRVRETNVSG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggaggcgattcggacgccgaagggaacgcccccgacaccgacaccgagggg
aacccctccgaccccgacgctgacgccacccccatccagctctcccggttcctcgacgtc
gtcgagcgcgaagagcgtcccgtactgaccgcccagcaggctgcccgtcgacttgactgt
acccaggcacaggccagggacgcgctcgacgacctcgcaaggcgaggagagatcgaacgg
gtcgacgtggagactgacccagtcgtgtactaccccacggagtggcgcaaactggcgcgt
cgcgagcgtgtcgtcgtctttccgacccggcgggagatcgtcgtcgatcagcccacccag
tacacccgggcacaactgacgcagttcgcccatctcgtggacacgaccggaaccgacccc
gggactcgagggtacctctaccgggtccggcccgaagacgtctgggtcgcgccgttcgag
gagttcgaggaactgctgtcgaccgttcgatccgctctcccacggcggtattcacacctc
gaggagtggatggaagaccagtgggagcgcgcccaccagtttcgtctgtacacccacgag
gacggctacgtcgtgctcgaggcagcctccgagagcttgatgggcaacgtcgccgaggag
aaactcgacgaggacgcgatccgggcaccgatctccgacaccgaggcgtggatcaacggc
gaccgtatcgccgggatcaagcggacgctgtacgacgccggctaccccgtcgtcgacgac
cgcgaactggagaccggcgacggtctcgacgtcgaactcaccacggacctgcgcgaatac
cagcagtcgtgggtcgagtcgttcctcgacaaacaggcgggggtgttcgtcgggccgccc
ggaagcgggaagactgtcgccgcaatcgcgacgatcgccgccgtcgacggcgagaccctg
attctggttccctcccgcgaactcgccgaacagtggcgggaggaactgctcgcgcacacg
gacctcactcgcgagcagatcggcgcctaccacggcggcgaaaagcggatccggccggtc
acgatcgcgacctaccagaccgccgggatggacagacatcgtcaactgttcgactcccgc
aagtgggggctgatcgtctacgacgaggtccatcacgtccccagcgacgtctaccgccgc
agcgccgacctccaggcggtccaccggctcgggctgtcggcgacgccggtccgggaggac
gaaagcgaggcggagatcttcacgctcatcgggccaccgatcggcaccgactgggacgcg
ctgttcgaggcggggttcgtccaggagcccgaactcgagatccggtacgttccatggcgc
gacgacacggcgagaaacgagtacacgagcaccgacgggcgggaacgctaccgactggcc
gcacagaaccccgccaaactggacgaggtagagtacctgctcgccagacacgacgatcgc
aaggcgctcgtgttcgtcgactacctcgaccagggcgagaagatcgccgaggccctatcg
gtgccgttcgtcagcggcgacacgcctcactaccgtcgcgaacagttgttctccgagctc
cgcgaggggacgcggcggaccctcgtcgtctcccggatcgccgacgaggggatcgacctc
ccggacgccgaggtggcgatcctggcgtcgggactgggcggctcccggcggcagggcgcc
cagcgggcgggtcggacgatgcgtccggccgggtcggcgctggtgttcgtactcgccacc
cgcgggagccgcgaggaggagttcgcccggcggcagctccgccacctggctggcaagggg
atccgcgtgcgggagacgaacgtgagcggctga
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